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Protein

Endo-1,4-beta-xylanase

Gene

xynD

Organism
Caldicellulosiruptor sp. Rt69B.1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

Pathwayi: xylan degradation

This protein is involved in the pathway xylan degradation, which is part of Glycan degradation.PROSITE-ProRule annotation
View all proteins of this organism that are known to be involved in the pathway xylan degradation and in Glycan degradation.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei105NucleophilePROSITE-ProRule annotation1
Active sitei195Proton donorPROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidasePROSITE-ProRule annotationImported, Hydrolase
Biological processCarbohydrate metabolism, Polysaccharide degradation, Xylan degradationPROSITE-ProRule annotationImported

Enzyme and pathway databases

UniPathwayiUPA00114.

Protein family/group databases

CAZyiCBM36. Carbohydrate-Binding Module Family 36.
GH11. Glycoside Hydrolase Family 11.
mycoCLAPiXYN11D_CALSP.

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-1,4-beta-xylanasePROSITE-ProRule annotation (EC:3.2.1.8PROSITE-ProRule annotation)
Gene namesi
Name:xynDImported
OrganismiCaldicellulosiruptor sp. Rt69B.1Imported
Taxonomic identifieri70295 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor

Structurei

3D structure databases

ProteinModelPortaliO52375.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 208GH11InterPro annotationAdd BLAST193
Domaini243 – 361CBM6InterPro annotationAdd BLAST119

Sequence similaritiesi

Belongs to the glycosyl hydrolase 11 (cellulase G) family.PROSITE-ProRule annotation

Family and domain databases

Gene3Di2.60.120.180. 1 hit.
2.60.120.260. 1 hit.
InterProiView protein in InterPro
IPR005084. CMB_fam6.
IPR013320. ConA-like_dom.
IPR008979. Galactose-bd-like.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
PfamiView protein in Pfam
PF03422. CBM_6. 1 hit.
PF00457. Glyco_hydro_11. 1 hit.
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF49899. SSF49899. 1 hit.
PROSITEiView protein in PROSITE
PS51175. CBM6. 1 hit.
PS00776. GH11_1. 1 hit.
PS00777. GH11_2. 1 hit.
PS51761. GH11_3. 1 hit.

Sequencei

Sequence statusi: Complete.

O52375-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCVVLANPFY AQAAMTFTSN ATGTYDGYYY ELWKDTGNTT MTVDTGGRFS
60 70 80 90 100
CQWSNINNAL FRTGKKFSTA WNQLGTVKIT YSATYNPNGN SYLCIYGWSR
110 120 130 140 150
NPLVEFYIVE SWGSWRPPGA TSLGTVTIDG ATYDIYKTTR VNQPSIEGTR
160 170 180 190 200
TFDQYWSVRT SKRTSGTVTV TDHFKAWAAK GLNLGTIDQI TLCVEGYQSS
210 220 230 240 250
GSANITQNTF TIGGSSSGSS NGSNNGSNDG SNGGTNAGIS TASRIECESM
260 270 280 290 300
SLSGPYVSRI TYPFNGIALY ANGDRATANV NFSASRNYTF KLRGCGNNNN
310 320 330 340 350
LASVDLLIDG KKVGSFYYKG TYPWEASINN VYVSAGTHRV ELVLSADNGT
360
WDVYADYLLI Q
Length:361
Mass (Da):39,284
Last modified:June 1, 1998 - v1
Checksum:iB6B71AEE62DB9767
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AH005808 Genomic DNA. Translation: AAB95327.1.

Similar proteinsi

Entry informationi

Entry nameiO52375_9FIRM
AccessioniPrimary (citable) accession number: O52375
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: September 27, 2017
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)