O52375 (O52375_9FIRM) Unreviewed, UniProtKB/TrEMBL
Last modified
September 21, 2011.
Version 53.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Endo-1,4-beta-xylanase RuleBase RU004392 EC=3.2.1.8 RuleBase RU004392 | ||
| Gene names |
| ||
| Organism | Caldicellulosiruptor sp. Rt69B.1 EMBL AAB95327.1 | ||
| Taxonomic identifier | 70295 [NCBI] | ||
| Taxonomic lineage | Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor |
Protein attributes
| Sequence length | 361 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392 |
| Pathway | |
| Sequence similarities | Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Xylan degradation RuleBase RU003433 EMBL AAB95327.1 |
| Molecular function | Glycosidase RuleBase RU003433 EMBL AAB95327.1 Hydrolase |
| Gene Ontology (GO) | |
| Biological process | xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | carbohydrate binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Family 10 and 11 xylanase genes from Caldicellulosiruptor sp. strain Rt69B.1." Morris D.D., Gibbs M.D., Ford M., Thomas J., Bergquist P.L. Extremophiles 3:103-111(1999) [PubMed: 10356996] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Rt69B.1 EMBL AAB95327.1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF036925 Genomic DNA. Translation: AAB95327.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1F5J based on UniProtKB P77853. |
| ProteinModelPortal | O52375. |
| SMR | O52375. Positions 17-211. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | CBM36. Carbohydrate-Binding Module Family 36. GH11. Glycoside Hydrolase Family 11. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Family and domain databases | |
| InterPro | IPR005084. CMB_fam6. IPR008985. ConA-like_lec_gl. IPR008979. Galactose-bd-like. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. [Graphical view] |
| Gene3D | G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit. |
| Pfam | PF03422. CBM_6. 1 hit. PF00457. Glyco_hydro_11. 1 hit. [Graphical view] |
| PRINTS | PR00911. GLHYDRLASE11. |
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. SSF49785. Gal_bind_like. 1 hit. |
| PROSITE | PS51175. CBM6. 1 hit. PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | O52375_9FIRM | ||||||||
| Accession | Primary (citable) accession number: O52375 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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