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O52374 (O52374_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Family 10 xylanase EMBL AAB95326.1
EC=3.2.1.8 EMBL AAB95326.1
Gene names
Name:xynC EMBL AAB95326.1
OrganismCaldicellulosiruptor sp. Rt69B.1 EMBL AAB95326.1
Taxonomic identifier70295 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length1779 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Sequences

Sequence LengthMass (Da)Tools
O52374 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: CE5269B6806B5CED

FASTA1,779194,305
        10         20         30         40         50         60 
MKKRVISILS LLFFLINTLV GTLIFHQEAK AAAYTVDFEG TDTLSFFAYG KSNIAVDMGN 

        70         80         90        100        110        120 
AYNGKSSIRV SNRSSIWDGV AVDVKNIMNN GTTWVVSAYV KHSYQKPVAF GISAVYDDGS 

       130        140        150        160        170        180 
GVKSTLIGEV VAIPNYWKKI VGKWTPNISN VRNLLIVVHT IVESGVDYNV DYIQIMDDNS 

       190        200        210        220        230        240 
YLSNAVTFSS GFESGTTEGW QARGSGVTVK PDSVVAYNGK YSLYVSGRTS NWHGAQIPVD 

       250        260        270        280        290        300 
TILEQGKVYK ISVWVYQNSG STQKMSLTMQ RRFATDPSTS YENLIYNRDV PSNTWVEPSG 

       310        320        330        340        350        360 
SYSIPAGVTV SELLLYVEAQ NANLAFWVDD LKIYDLSKLA EPEWEIPSLI EKYKDYFKVG 

       370        380        390        400        410        420 
VALSYKSIAS DTEKKMVLKH FNSITAGNEM KPSELLISEN NYNFSKADEF VNFATSNNIA 

       430        440        450        460        470        480 
IRGHTLVWHE QTPDWFFKDA NGNTLSKDAL LSRLKQYIYT VVGRYKGKVY AWDVVNEAID 

       490        500        510        520        530        540 
ESQGNGFRRS NWYNICGPEY IEKAFIWAHE ADPDAKLFYN DYNTENSQKR QFIYNMIKSL 

       550        560        570        580        590        600 
KEKGVPIHGI GLQCHINLDW PSISEIENTI KLFSSIPGLE IHITELDMSF YQWGSSTSYS 

       610        620        630        640        650        660 
TPPRDLLIKQ AMRYKELFDL FKKYNVITNV TFWGLKDDYS WLSQNFGKSD YPLLFDGNYK 

       670        680        690        700        710        720 
SKYAFWSLIE PTVVPVNSTL PAPPAIQVPT PTSTPTPTPT PTVSATPTPA PTASPAGGSY 

       730        740        750        760        770        780 
WTPSESYGAL KVWYANGNMS STTNVLNPKI KIENVGTTAV DLSRVKVRYW YTIDGEAAQS 

       790        800        810        820        830        840 
VSVASSINPA YIDVRVVKLG ANAGGADYYV EVGFKSGAGV LAAGQSTKEI RLSIQKSSGS 

       850        860        870        880        890        900 
YNQSNDYSVR SANSYIENEK VTGYIDDVLV WGREPGRNAQ IKVWYANGNL SSPTNVLNPK 

       910        920        930        940        950        960 
IKIENVGTTA VDLSRVKVRY WYTIDGEATQ SVSVASSINP AYIDVRVVKL GANAGGADYY 

       970        980        990       1000       1010       1020 
VEVGFKSGAG VLAAGQSTKE IRLSIQKSSG SYNQSNDYSV RSANSYIENE KVTGYIDDVL 

      1030       1040       1050       1060       1070       1080 
VWGKEPSRGT KPAGEVTPAP TPTSTPTPTP TTTPAPTSAP TPSPTVTATP TPTPTPTATP 

      1090       1100       1110       1120       1130       1140 
TPTPTTTPTP TPTPTVTVTP TPTPTGTPGT GSGLKVLYKN NETSASTGSI RPWFKIVNGG 

      1150       1160       1170       1180       1190       1200 
SSSVDLSRVK IRYWYTVDGD KPQSAVCDWA QIGASNVTFN FVKLTSGVSG ADYYLEVGFS 

      1210       1220       1230       1240       1250       1260 
SGAGQLQPGK DTGDIQVRFN KNDWSNYNQA DDWSWMQSMT NYGENAKVTL YVDGVLVWGQ 

      1270       1280       1290       1300       1310       1320 
EPGGATPAPT STATPTPTPT ATVTPTPTAT PTPTPTPTAT TTPIPTPTTP PTKPVGKIPP 

      1330       1340       1350       1360       1370       1380 
NNNPLISHKF GADPAVLVYG GRVYMYLTND ILEYDENGNV KDNSYSKINK ITVISSDDLV 

      1390       1400       1410       1420       1430       1440 
NWTDHGEIEV AGPNGVAKWA NFSWAPAVAY KKINGKDRFF LYFGNSGGGI GVITADSPTG 

      1450       1460       1470       1480       1490       1500 
PWSDPLGRPL ITWSTPGVQG VVWLFDPAVL VDDDGKAYIY FGGGVPQGQD AMPNTARVLQ 

      1510       1520       1530       1540       1550       1560 
PGDDMISVVG SAATIPAPYM FEDSGINKIG NTYYYSYCTN FAQRPQGSPP AGAIAYMTGK 

      1570       1580       1590       1600       1610       1620 
SPVGPWEYRG VILRNPGNFF GVGGNNHHQL FEFNGKWYIA YHAQTLAKDL GVAKGYRSPH 

      1630       1640       1650       1660       1670       1680 
INQVQIENGV IKEVTADYKG VAQVKNFDPY RMVEAETFAW CAGISTKKAN ASNNMCLTGI 

      1690       1700       1710       1720       1730       1740 
DSGDWIALSR VDFGNAGPQK FEAQVSNING KGYIELRIDS VDGRTIAVAE VLPQSGSSSQ 

      1750       1760       1770 
WVKVEANVEN VTGVHDLYLV FRGEKKSNLF DMDCWRFVR

« Hide

References

[1]"Family 10 and 11 xylanase genes from Caldicellulosiruptor sp. strain Rt69B.1."
Morris D.D., Gibbs M.D., Ford M., Thomas J., Bergquist P.L.
Extremophiles 3:103-111(1999) [PubMed: 10356996] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Rt69B.1 EMBL AAB95326.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF036924 Genomic DNA. Translation: AAB95326.1.
PIRT31085.

3D structure databases

HSSPHSSP built from PDB template 1NBC based on UniProtKB Q06851.
ProteinModelPortalO52374.
ModBaseSearch...

Protein family/group databases

CAZyCBM22. Carbohydrate-Binding Module Family 22.
CBM3. Carbohydrate-Binding Module Family 3.
CBM6. Carbohydrate-Binding Module Family 6.
GH10. Glycoside Hydrolase Family 10.
GH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR008965. Carb-bd_dom.
IPR001956. CBD_3.
IPR006584. Cellulose-bd_IV.
IPR003305. CenC_carb-bd.
IPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR001000. Glyco_hydro_10.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.710. CBD_3. 3 hits.
G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF00942. CBM_3. 3 hits.
PF02018. CBM_4_9. 2 hits.
PF03422. CBM_6. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
PRINTSPR00134. GLHYDRLASE10.
SMARTSM00606. CBD_IV. 1 hit.
SM01067. CBM_3. 3 hits.
SM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 3 hits.
SSF49785. Gal_bind_like. 3 hits.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS51172. CBM3. 3 hits.
PS51175. CBM6. 1 hit.
PS00591. GLYCOSYL_HYDROL_F10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO52374_9FIRM
AccessionPrimary (citable) accession number: O52374
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info