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Protein

30S ribosomal protein S17

Gene

rpsQ

Organism
Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciMGAL710127:GC09-61-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Gene namesi
Name:rpsQUniRule annotation
Synonyms:rps17UniRule annotation
Ordered Locus Names:MYCGA0600
ORF Names:MGA_0725
OrganismiMycoplasma gallisepticum (strain R(low / passage 15 / clone 2))
Taxonomic identifieri710127 [NCBI]
Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
Proteomesi
  • UP000001418 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001284671 – 8530S ribosomal protein S17Add BLAST85

Proteomic databases

PRIDEiO52341.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO52341.
SMRiO52341.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000231339.
KOiK02961.
OMAiHPMYGKF.

Family and domain databases

HAMAPiMF_01345_B. Ribosomal_S17_B. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR019984. Ribosomal_S17.
IPR000266. Ribosomal_S17/S11.
IPR019979. Ribosomal_S17_CS.
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiView protein in Pfam
PF00366. Ribosomal_S17. 1 hit.
PRINTSiPR00973. RIBOSOMALS17.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295. Ribosomal_S17. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03635. uS17_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00056. RIBOSOMAL_S17. 1 hit.

Sequencei

Sequence statusi: Complete.

O52341-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNSRKVLMG VVVSDKMQKT ATVKVESKNR HPFYHKLVIS HKKYHVHNEE
60 70 80
GENAAKVGDK VLIMETRPLS ATKRWRIAKI IERAK
Length:85
Mass (Da):9,879
Last modified:June 1, 1998 - v1
Checksum:i870A9036995F008F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF036708 Genomic DNA. Translation: AAB95396.1.
AE015450 Genomic DNA. Translation: AAP56410.1.
RefSeqiWP_011113289.1. NC_004829.2.

Genome annotation databases

EnsemblBacteriaiAAP56410; AAP56410; MGA_0725.
GeneIDi1090109.
KEGGimga:MGA_0725.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS17_MYCGA
AccessioniPrimary (citable) accession number: O52341
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: June 1, 1998
Last modified: June 7, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families