Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the binding of tRNA to the ribosomes.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMGAL710127:GC09-51-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S10UniRule annotation
Gene namesi
Name:rpsJUniRule annotation
Synonyms:rps10UniRule annotation
Ordered Locus Names:MYCGA0500
ORF Names:MGA_0705
OrganismiMycoplasma gallisepticum (strain R(low / passage 15 / clone 2))
Taxonomic identifieri710127 [NCBI]
Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
Proteomesi
  • UP000001418 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12112130S ribosomal protein S10PRO_0000146551Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO52331.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S10P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000270246.
KOiK02946.
OMAiIESLMHI.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O52331-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQKAKSSK TSSEEAKKQK ELTEIKIKLK SYDSRLLDQS VKKIFEIVKE
60 70 80 90 100
TGSKFCGPIP LPTKKEVFTI IRSPHVDKAS REQFERRTHK RLIIIKNLKN
110 120
ETIQKLKRFV IPSGVELRIY L
Length:121
Mass (Da):14,128
Last modified:August 15, 2003 - v2
Checksum:i47CFB79E1E8C112C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti114 – 1141G → C in AAB95386 (PubMed:10867916).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF036708 Genomic DNA. Translation: AAB95386.1.
AE015450 Genomic DNA. Translation: AAP56400.2.
RefSeqiWP_011113279.1. NC_004829.2.

Genome annotation databases

EnsemblBacteriaiAAP56400; AAP56400; MGA_0705.
GeneIDi1090099.
KEGGimga:MGA_0705.
PATRICi20007772. VBIMycGal115357_0054.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF036708 Genomic DNA. Translation: AAB95386.1.
AE015450 Genomic DNA. Translation: AAP56400.2.
RefSeqiWP_011113279.1. NC_004829.2.

3D structure databases

ProteinModelPortaliO52331.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAP56400; AAP56400; MGA_0705.
GeneIDi1090099.
KEGGimga:MGA_0705.
PATRICi20007772. VBIMycGal115357_0054.

Phylogenomic databases

HOGENOMiHOG000270246.
KOiK02946.
OMAiIESLMHI.

Enzyme and pathway databases

BioCyciMGAL710127:GC09-51-MONOMER.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Determination and analysis of the nucleotide sequence of a segment of a Mycoplasma gallisepticum strain A5969 chromosome, containing operons S10 and rrn23-5."
    Skamrov A.V., Gol'dman M.A., Feoktistova E.S., Bibilashvili R.S.
    Mol. Biol. (Mosk.) 34:390-396(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: A5969Var.B.
  2. "The complete genome sequence of the avian pathogen Mycoplasma gallisepticum strain R(low)."
    Papazisi L., Gorton T.S., Kutish G., Markham P.F., Browning G.F., Nguyen D.K., Swartzell S., Madan A., Mahairas G., Geary S.J.
    Microbiology 149:2307-2316(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R(low / passage 15 / clone 2).

Entry informationi

Entry nameiRS10_MYCGA
AccessioniPrimary (citable) accession number: O52331
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 15, 2003
Last modified: May 11, 2016
This is version 95 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.