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Protein
Submitted name:

Putative RNA polymerase secondary sigma factor

Gene

sigG

Organism
Streptomyces coelicolor
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation, Sigma factorSAAS annotation
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative RNA polymerase secondary sigma factorImported
Gene namesi
Name:sigGImported
OrganismiStreptomyces coelicolorImported
Taxonomic identifieri1902 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group

Structurei

3D structure databases

ProteinModelPortaliO52313
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 110Sigma70_r2InterPro annotationAdd BLAST70
Domaini121 – 174Sigma70_r3InterPro annotationAdd BLAST54
Domaini207 – 256Sigma70_r4InterPro annotationAdd BLAST50

Sequence similaritiesi

Belongs to the sigma-70 factor family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108N6D Bacteria
COG1191 LUCA
HOGENOMiHOG000270270
KOiK03090
PhylomeDBiO52313

Family and domain databases

Gene3Di1.10.10.10, 2 hits
InterProiView protein in InterPro
IPR014284 RNA_pol_sigma-70_dom
IPR014322 RNA_pol_sigma-B/F/G
IPR000943 RNA_pol_sigma70
IPR007627 RNA_pol_sigma70_r2
IPR007624 RNA_pol_sigma70_r3
IPR007630 RNA_pol_sigma70_r4
IPR013325 RNA_pol_sigma_r2
IPR013324 RNA_pol_sigma_r3/r4-like
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF04542 Sigma70_r2, 1 hit
PF04539 Sigma70_r3, 1 hit
PF04545 Sigma70_r4, 1 hit
PRINTSiPR00046 SIGMA70FCT
SUPFAMiSSF88659 SSF88659, 2 hits
SSF88946 SSF88946, 1 hit
TIGRFAMsiTIGR02980 SigBFG, 1 hit
TIGR02937 sigma70-ECF, 1 hit

Sequencei

Sequence statusi: Complete.

O52313-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVAGRTQPH PHDDAPDTAA AFERLAGLPE GPERKALRDD LIRVWLPMAE
60 70 80 90 100
RIAVRFRGRG ENLEDLYQVA ALGLVKAVDH YDPERGHAFE AYAVPTVTGE
110 120 130 140 150
IKRHFRDHMW TLHVPRRIQD LRNRVRKSAK ELAQTTPGRA PTVEEIAEHA
160 170 180 190 200
QLTTAEVRTG MEALECFSAL SLEAEMPGTD GYALGDALGG PDPAFDAVVD
210 220 230 240 250
RVAVRPCLEA LPERERTILY LRFFGGMTQS RIAQQLGISQ MHVSRLLTGC
260
FDRIREEILA EAR
Length:263
Mass (Da):29,423
Last modified:June 1, 1998 - v1
Checksum:i667B4525422663EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF036131 Genomic DNA Translation: AAC01582.1
RefSeqiNP_631395.1, NC_003888.3

Genome annotation databases

GeneIDi1102779
KEGGisco:SCO7341

Similar proteinsi

Entry informationi

Entry nameiO52313_STRCH
AccessioniPrimary (citable) accession number: O52313
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 25, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health