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Protein
Submitted name:

SdeK

Gene

sdeK

Organism
Myxococcus xanthus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Catalytic activityi

ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.SAAS annotation

GO - Molecular functioni

GO - Biological processi

  • response to starvation Source: CACAO
Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotation, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
SdeKImported
Gene namesi
Name:sdeKImported
OrganismiMyxococcus xanthusImported
Taxonomic identifieri34 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi246197.MXAN_1014.

Structurei

3D structure databases

ProteinModelPortaliO52237.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini148 – 21871PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini283 – 502220Histidine kinaseInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4106M9K. Bacteria.
COG4251. LUCA.

Family and domain databases

Gene3Di1.10.287.130. 1 hit.
3.30.565.10. 1 hit.
InterProiIPR003594. HATPase_C.
IPR005467. His_kinase_dom.
IPR003661. HisK_dim/P.
IPR000014. PAS.
IPR013656. PAS_4.
IPR004358. Sig_transdc_His_kin-like_C.
[Graphical view]
PfamiPF02518. HATPase_c. 1 hit.
PF00512. HisKA. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
PRINTSiPR00344. BCTRLSENSOR.
SMARTiSM00387. HATPase_c. 1 hit.
SM00388. HisKA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF47384. SSF47384. 1 hit.
SSF55785. SSF55785. 2 hits.
SSF55874. SSF55874. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50109. HIS_KIN. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O52237-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHNGSIGGH ADMSSGRGIN RCQGTEGDEP LSEAVVVLRN VRSAVGGIVD
60 70 80 90 100
FECVSANVHA ERWLGGEEGS LVHNRLLEEA PWAWDGGLFS ACVRVVTRRA
110 120 130 140 150
PEIARVSRQS PMGTVWLLAR VSPCDDGVVL FLEDLTERMA AEEALRRDHD
160 170 180 190 200
LLHAVIESAT DAIYVKDVSG RYILINPATA SAFHRAPREI LGRTDAELLG
210 220 230 240 250
ADRAAPTLAH DREVMSSGHT ATYEGAEGGP GTDRIWHTTK GVLRRGDGTV
260 270 280 290 300
YGLFAICRDV TARRRQELER EEEARFQERF IGVLGHDLGN PLAAVRLSSA
310 320 330 340 350
ALLARDTLPP EVRRVVARID GSAERMARLV KQLLDFTRAR MAGGIPLRPH
360 370 380 390 400
EVCMEDVCRR IISELEPAHP ECCVRLEVDG ESRGIWDEER LGQVLSNLLG
410 420 430 440 450
NALQHSPEGS SVRVRLAAKD SLFQRVEVHN GGPPIPESLR PRLFSPFHGV
460 470 480 490 500
PPEPGQPKPK HQGLGLGLYI VSQIVTAHGG WLDVASSADT GTCFSVTLPR
510
VTRPLGGPPG KTA
Length:513
Mass (Da):55,718
Last modified:June 1, 1998 - v1
Checksum:iE5BBA40A7AA4171D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF031084 Genomic DNA. Translation: AAB94135.1.
PIRiT31115.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF031084 Genomic DNA. Translation: AAB94135.1.
PIRiT31115.

3D structure databases

ProteinModelPortaliO52237.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246197.MXAN_1014.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4106M9K. Bacteria.
COG4251. LUCA.

Family and domain databases

Gene3Di1.10.287.130. 1 hit.
3.30.565.10. 1 hit.
InterProiIPR003594. HATPase_C.
IPR005467. His_kinase_dom.
IPR003661. HisK_dim/P.
IPR000014. PAS.
IPR013656. PAS_4.
IPR004358. Sig_transdc_His_kin-like_C.
[Graphical view]
PfamiPF02518. HATPase_c. 1 hit.
PF00512. HisKA. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
PRINTSiPR00344. BCTRLSENSOR.
SMARTiSM00387. HATPase_c. 1 hit.
SM00388. HisKA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF47384. SSF47384. 1 hit.
SSF55785. SSF55785. 2 hits.
SSF55874. SSF55874. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50109. HIS_KIN. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "SdeK is required for early fruiting body development in Myxococcus xanthus."
    Garza A.G., Pollack J.S., Harris B.Z., Lee A., Keseler I.M., Licking E.F., Singer M.
    J. Bacteriol. 180:4628-4637(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DK101Imported.

Entry informationi

Entry nameiO52237_MYXXA
AccessioniPrimary (citable) accession number: O52237
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.