Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative DNA-binding protein SalA

Gene

salA

Organism
Pseudomonas syringae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA-binding protein SalAImported
Gene namesi
Name:salAImported
OrganismiPseudomonas syringaeImported
Taxonomic identifieri317 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Interactioni

Protein-protein interaction databases

STRINGi205918.Psyr_2601.

Structurei

3D structure databases

ProteinModelPortaliO52160.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini208 – 26558HTH luxR-type DNA-bindingInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.

Sequencei

Sequence statusi: Complete.

O52160-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNMQQLFPHL GKVISGIGSR QFARLLHEMI TASLPVDATH VIQGLSRSTN
60 70 80 90 100
EVTGTHAIGV FGGNLHQVLN PGIDNRRLEP VLLSPTELAD TRVDRSIRFE
110 120 130 140 150
SPAYNAQEKP GELHPHASLP QVHLAYPGKG EYVLSVYRSP SAKAFTSQER
160 170 180 190 200
ARLKDLSWVV LPIVKQHIAT VTPTLISTIP SPVTKSLKNK DAMEGLRQRF
210 220 230 240 250
LGRLEASALS LSSRETEVCV GLLAGLTVPQ LADRLDLKVS TVESYFKRAA
260 270 280
VKMGIAGRSA LLRWLHTEHR VQHSIPVEMF QAAV
Length:284
Mass (Da):31,222
Last modified:June 1, 1998 - v1
Checksum:iAC5EC3314AF980ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022808 Genomic DNA. Translation: AAC46414.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022808 Genomic DNA. Translation: AAC46414.1.

3D structure databases

ProteinModelPortaliO52160.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205918.Psyr_2601.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO52160_PSESX
AccessioniPrimary (citable) accession number: O52160
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.