Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Transport permease protein

Gene

kpsM

Organism
Escherichia coli
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Transport permease proteinUniRule annotation
Gene namesi
Name:kpsMImported
ORF Names:SK83_00419Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000036158 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei40 – 60HelicalUniRule annotationAdd BLAST21
Transmembranei66 – 85HelicalUniRule annotationAdd BLAST20
Transmembranei123 – 141HelicalUniRule annotationAdd BLAST19
Transmembranei153 – 175HelicalUniRule annotationAdd BLAST23
Transmembranei182 – 203HelicalUniRule annotationAdd BLAST22
Transmembranei237 – 256HelicalUniRule annotationAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 225ABC2_membraneInterPro annotationAdd BLAST204

Sequence similaritiesi

Belongs to the ABC-2 integral membrane protein family.UniRule annotation
Contains 1 ABC transmembrane type-2 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O51864-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKPIISQTP RTSLQVLRDV VFGLLIRELK TRFGNYRLGY AWALLDPLLM
60 70 80 90 100
ISLFSVVFGM RSQSGFGGVP AQVFITAGYL PFMFFNKVVT QLKSAVNANM
110 120 130 140 150
GLFCYRQVTP FATFIARFML ETMVGMIVGI ILVLGLLWFG FDAIPADPLQ
160 170 180 190 200
VILGYSLLML FSFSLGIVFC VICNLAKEAD KFLSLLMMPL MFISCVMFPL
210 220 230 240 250
ATIPPQYQHW FLWNPLVHAV ELIRRAWISG YRSPDVSWAY LSVVTLLLLT
260
FAMSCYRLRH RQLIAS
Length:266
Mass (Da):30,184
Last modified:June 1, 1998 - v1
Checksum:iCC79D25DDC4F22F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF007777 Genomic DNA. Translation: AAC38078.1.
LEUK01000001 Genomic DNA. Translation: KLX93339.1.
RefSeqiWP_000360426.1. NZ_MCBU01000031.1.

Genome annotation databases

EnsemblBacteriaiKLX93339; KLX93339; SK83_00419.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF007777 Genomic DNA. Translation: AAC38078.1.
LEUK01000001 Genomic DNA. Translation: KLX93339.1.
RefSeqiWP_000360426.1. NZ_MCBU01000031.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKLX93339; KLX93339; SK83_00419.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO51864_ECOLX
AccessioniPrimary (citable) accession number: O51864
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.