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Protein
Submitted name:

Rod shape-determining protein RodA

Gene

mrdB

Organism
Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rod shape-determining protein RodAImported
Gene namesi
Name:mrdBImported
Ordered Locus Names:BB_0719Imported
OrganismiBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)Imported
Taxonomic identifieri224326 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBorreliaceaeBorreliella
Proteomesi
  • UP000001807 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Transmembranei47 – 64HelicalSequence analysisAdd BLAST18
Transmembranei71 – 92HelicalSequence analysisAdd BLAST22
Transmembranei98 – 121HelicalSequence analysisAdd BLAST24
Transmembranei133 – 153HelicalSequence analysisAdd BLAST21
Transmembranei159 – 175HelicalSequence analysisAdd BLAST17
Transmembranei180 – 199HelicalSequence analysisAdd BLAST20
Transmembranei219 – 240HelicalSequence analysisAdd BLAST22
Transmembranei249 – 267HelicalSequence analysisAdd BLAST19
Transmembranei344 – 365HelicalSequence analysisAdd BLAST22
Transmembranei377 – 398HelicalSequence analysisAdd BLAST22
Transmembranei410 – 431HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiO51661.

Interactioni

Protein-protein interaction databases

STRINGi224326.BB_0719.

Family & Domainsi

Sequence similaritiesi

Belongs to the SEDS family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CNI. Bacteria.
COG0772. LUCA.
KOiK05837.

Family and domain databases

InterProiIPR018365. Cell_cycle_FtsW-rel_CS.
IPR001182. Cell_cycle_FtsW/RodA.
IPR011923. RodA_shape.
[Graphical view]
PANTHERiPTHR30474. PTHR30474. 2 hits.
PTHR30474:SF1. PTHR30474:SF1. 2 hits.
PfamiPF01098. FTSW_RODA_SPOVE. 2 hits.
[Graphical view]
TIGRFAMsiTIGR02210. rodA_shape. 1 hit.
PROSITEiPS00428. FTSW_RODA_SPOVE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O51661-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFRKNYDYL ALISLLIVSF VGILLIYSSD YNISGSLTKN EYIKQTFWVI
60 70 80 90 100
IGFFLIFIVG KYDLKFVYSM VYPLYFLLIL ALIFTAFFGM TVNGARSWIG
110 120 130 140 150
IWKLGGQPSE FGKVVIILTL SKFYTEKKGY NEFFTFITAF LLIFPSVILI
160 170 180 190 200
LLQPDFGTAI VYLTIFIFIS FFAGIDLHYV LAFALIGFFS FVFAILPVWY
210 220 230 240 250
EYKVNMGNVF YLIFSNPFYF RVIMGVLLLI LLISVLGFFI SKYGLSIKII
260 270 280 290 300
YFYVFFASSI LLVSIVFSKV LSKLMKTYQI KRFLVFLDPA IDAKGAGWNL
310 320 330 340 350
NQVKIAIGSG GLLGKGFLKG PYTHANYVPS QSTDFIFSIL AEEFGFLGVS
360 370 380 390 400
TILILFFFLF FKFLIIMNKS QDRYMALVIS GILGLLFFHT SFNVGMSLGV
410 420 430
LPITGIPFPF LSYGGSSTIT FFLAMSFYFN IESIVAMD
Length:438
Mass (Da):49,782
Last modified:January 25, 2012 - v2
Checksum:i31EBBC1DA48CC925
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000783 Genomic DNA. Translation: AAC67055.2.
RefSeqiNP_212853.2. NC_001318.1.
WP_010889807.1. NC_001318.1.

Genome annotation databases

EnsemblBacteriaiAAC67055; AAC67055; BB_0719.
GeneIDi1195573.
KEGGibbu:BB_0719.
PATRICi20558093. VBIBorBur75917_1110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000783 Genomic DNA. Translation: AAC67055.2.
RefSeqiNP_212853.2. NC_001318.1.
WP_010889807.1. NC_001318.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224326.BB_0719.

Proteomic databases

PRIDEiO51661.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC67055; AAC67055; BB_0719.
GeneIDi1195573.
KEGGibbu:BB_0719.
PATRICi20558093. VBIBorBur75917_1110.

Phylogenomic databases

eggNOGiENOG4105CNI. Bacteria.
COG0772. LUCA.
KOiK05837.

Family and domain databases

InterProiIPR018365. Cell_cycle_FtsW-rel_CS.
IPR001182. Cell_cycle_FtsW/RodA.
IPR011923. RodA_shape.
[Graphical view]
PANTHERiPTHR30474. PTHR30474. 2 hits.
PTHR30474:SF1. PTHR30474:SF1. 2 hits.
PfamiPF01098. FTSW_RODA_SPOVE. 2 hits.
[Graphical view]
TIGRFAMsiTIGR02210. rodA_shape. 1 hit.
PROSITEiPS00428. FTSW_RODA_SPOVE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO51661_BORBU
AccessioniPrimary (citable) accession number: O51661
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: January 25, 2012
Last modified: November 2, 2016
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.