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Protein

Glutamate--tRNA ligase

Gene

gltX

Organism
Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).UniRule annotation

Catalytic activityi

ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu).UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei254 – 2541ATPUniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. glutamate-tRNA ligase activity Source: UniProtKB-HAMAP
  3. tRNA binding Source: InterPro

GO - Biological processi

  1. glutamyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBBUR224326:G9SO-369-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate--tRNA ligaseUniRule annotation (EC:6.1.1.17UniRule annotation)
Alternative name(s):
Glutamyl-tRNA synthetaseUniRule annotation
Short name:
GluRSUniRule annotation
Gene namesi
Name:gltXUniRule annotation
Ordered Locus Names:BB_0372
OrganismiBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Taxonomic identifieri224326 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeBorreliaBorrelia burgdorferi group
ProteomesiUP000001807 Componenti: Chromosome

Subcellular locationi

  1. Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 490490Glutamate--tRNA ligasePRO_0000119517Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi224326.BB0372.

Structurei

Secondary structure

1
490
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi4 – 74Combined sources
Beta strandi11 – 133Combined sources
Helixi17 – 3216Combined sources
Beta strandi36 – 394Combined sources
Helixi51 – 6414Combined sources
Beta strandi69 – 713Combined sources
Turni72 – 743Combined sources
Helixi83 – 853Combined sources
Helixi87 – 9913Combined sources
Beta strandi102 – 1065Combined sources
Helixi110 – 12213Combined sources
Turni132 – 1354Combined sources
Helixi138 – 1469Combined sources
Beta strandi152 – 1554Combined sources
Beta strandi162 – 1676Combined sources
Turni168 – 1703Combined sources
Beta strandi171 – 1766Combined sources
Helixi177 – 1793Combined sources
Beta strandi185 – 1873Combined sources
Helixi195 – 20511Combined sources
Beta strandi209 – 2146Combined sources
Helixi215 – 2206Combined sources
Helixi221 – 23111Combined sources
Beta strandi237 – 2415Combined sources
Beta strandi249 – 2513Combined sources
Turni254 – 2563Combined sources
Helixi261 – 2677Combined sources
Helixi271 – 28010Combined sources
Beta strandi281 – 2833Combined sources
Beta strandi285 – 2884Combined sources
Helixi294 – 3007Combined sources
Helixi303 – 3053Combined sources
Helixi315 – 32814Combined sources
Helixi331 – 34414Combined sources
Helixi354 – 36815Combined sources
Helixi376 – 3805Combined sources
Helixi382 – 3854Combined sources
Helixi393 – 3953Combined sources
Helixi405 – 41713Combined sources
Helixi420 – 4223Combined sources
Helixi425 – 43814Combined sources
Helixi444 – 45411Combined sources
Beta strandi455 – 4595Combined sources
Helixi463 – 4708Combined sources
Helixi472 – 48615Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GRIX-ray2.60A/B2-490[»]
ProteinModelPortaliO51345.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi9 – 1911"HIGH" regionAdd
BLAST
Motifi251 – 2555"KMSKS" region

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0008.
KOiK01885.
OMAiAFRCFCT.
OrthoDBiEOG6DRPF7.

Family and domain databases

Gene3Di1.10.10.350. 1 hit.
1.10.1160.10. 1 hit.
3.40.50.620. 2 hits.
HAMAPiMF_00022_B. Glu_tRNA_synth_B.
InterProiIPR008925. aa-tRNA-synth_I_codon-bd.
IPR020751. aa-tRNA-synth_I_codon-bd_sub2.
IPR004527. Glu-tRNA-ligase_bac/mito.
IPR000924. Glu/Gln-tRNA-synth.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PANTHERiPTHR10119. PTHR10119. 1 hit.
PfamiPF00749. tRNA-synt_1c. 1 hit.
[Graphical view]
PRINTSiPR00987. TRNASYNTHGLU.
SUPFAMiSSF48163. SSF48163. 1 hit.
TIGRFAMsiTIGR00464. gltX_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

O51345-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTRVRYAPS PTGLQHIGGI RTALFNYFFA KSCGGKFLLR IEDTDQSRYS
60 70 80 90 100
PEAENDLYSS LKWLGISFDE GPVVGGDYAP YVQSQRSAIY KQYAKYLIES
110 120 130 140 150
GHAYYCYCSP ERLERIKKIQ NINKMPPGYD RHCRNLSNEE VENALIKKIK
160 170 180 190 200
PVVRFKIPLE GDTSFDDILL GRITWANKDI SPDPVILKSD GLPTYHLANV
210 220 230 240 250
VDDYLMKITH VLRAQEWVSS GPLHVLLYKA FKWKPPIYCH LPMVMGNDGQ
260 270 280 290 300
KLSKRHGSTA LRQFIEDGYL PEAIINYVTL LGWSYDDKRE FFSKNDLEQF
310 320 330 340 350
FSIEKINKSP AIFDYHKLDF FNSYYIREKK DEDLFNLLLP FFQKKGYVSK
360 370 380 390 400
PSTLEENQKL KLLIPLIKSR IKKLSDALNM TKFFYEDIKS WNLDEFLSRK
410 420 430 440 450
KTAKEVCSIL ELIKPILEGF EKRSSEENDK IFYDFAESNG FKLGEILLPI
460 470 480 490
RIAALGSKVS PPLFDSLKLI GKSKVFERIK LAQEFLRINE
Length:490
Mass (Da):56,752
Last modified:June 1, 1998 - v1
Checksum:iE7ED6AD2474934F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000783 Genomic DNA. Translation: AAC66742.1.
PIRiC70146.
RefSeqiNP_212506.1. NC_001318.1.

Genome annotation databases

EnsemblBacteriaiAAC66742; AAC66742; BB_0372.
GeneIDi1195209.
KEGGibbu:BB_0372.
PATRICi20557354. VBIBorBur75917_0767.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000783 Genomic DNA. Translation: AAC66742.1.
PIRiC70146.
RefSeqiNP_212506.1. NC_001318.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GRIX-ray2.60A/B2-490[»]
ProteinModelPortaliO51345.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224326.BB0372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC66742; AAC66742; BB_0372.
GeneIDi1195209.
KEGGibbu:BB_0372.
PATRICi20557354. VBIBorBur75917_0767.

Phylogenomic databases

eggNOGiCOG0008.
KOiK01885.
OMAiAFRCFCT.
OrthoDBiEOG6DRPF7.

Enzyme and pathway databases

BioCyciBBUR224326:G9SO-369-MONOMER.

Family and domain databases

Gene3Di1.10.10.350. 1 hit.
1.10.1160.10. 1 hit.
3.40.50.620. 2 hits.
HAMAPiMF_00022_B. Glu_tRNA_synth_B.
InterProiIPR008925. aa-tRNA-synth_I_codon-bd.
IPR020751. aa-tRNA-synth_I_codon-bd_sub2.
IPR004527. Glu-tRNA-ligase_bac/mito.
IPR000924. Glu/Gln-tRNA-synth.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PANTHERiPTHR10119. PTHR10119. 1 hit.
PfamiPF00749. tRNA-synt_1c. 1 hit.
[Graphical view]
PRINTSiPR00987. TRNASYNTHGLU.
SUPFAMiSSF48163. SSF48163. 1 hit.
TIGRFAMsiTIGR00464. gltX_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35210 / B31 / CIP 102532 / DSM 4680.

Entry informationi

Entry nameiSYE_BORBU
AccessioniPrimary (citable) accession number: O51345
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: June 1, 1998
Last modified: January 7, 2015
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.