Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ferredoxin

Gene

fdxC

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • growth Source: MTBBASE
  • oxidation-reduction process Source: GOC
Complete GO annotation...

Keywords - Ligandi

4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
FerredoxinImported
Submitted name:
Probable ferredoxin FdxCImported
Gene namesi
Name:fdxCImported
Ordered Locus Names:Rv1177Imported
ORF Names:LH57_06470Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Organism-specific databases

TubercuListiRv1177.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv1177.

Structurei

3D structure databases

SMRiO50433. Positions 2-104.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 60304Fe-4S ferredoxin-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108Z4U. Bacteria.
COG1146. LUCA.
HOGENOMiHOG000044612.
OMAiSAYTQIN.
OrthoDBiEOG6CVV7G.
PhylomeDBiO50433.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
[Graphical view]
PfamiPF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O50433-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYTIAEPCV DIKDKACIEE CPVDCIYEGA RMLYIHPDEC VDCGACEPVC
60 70 80 90 100
PVEAIFYEDD VPEQWSHYTQ INADFFAELG SPGGAAKVGM TENDPQAVKD

LAPQSEDA
Length:108
Mass (Da):11,839
Last modified:June 1, 1998 - v1
Checksum:i0B5B5515F020447C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR13925.1.
AL123456 Genomic DNA. Translation: CCP43933.1.
RefSeqiNP_215693.1. NC_000962.3.
WP_003406185.1. NZ_KK339370.1.

Genome annotation databases

EnsemblBacteriaiAIR13925; AIR13925; LH57_06470.
CCP43933; CCP43933; Rv1177.
GeneIDi885869.
KEGGimtu:Rv1177.
mtv:RVBD_1177.
PATRICi18124440. VBIMycTub22151_1339.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR13925.1.
AL123456 Genomic DNA. Translation: CCP43933.1.
RefSeqiNP_215693.1. NC_000962.3.
WP_003406185.1. NZ_KK339370.1.

3D structure databases

SMRiO50433. Positions 2-104.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv1177.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR13925; AIR13925; LH57_06470.
CCP43933; CCP43933; Rv1177.
GeneIDi885869.
KEGGimtu:Rv1177.
mtv:RVBD_1177.
PATRICi18124440. VBIMycTub22151_1339.

Organism-specific databases

TubercuListiRv1177.

Phylogenomic databases

eggNOGiENOG4108Z4U. Bacteria.
COG1146. LUCA.
HOGENOMiHOG000044612.
OMAiSAYTQIN.
OrthoDBiEOG6CVV7G.
PhylomeDBiO50433.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
[Graphical view]
PfamiPF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported and H37RvImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "Phylogenetic analysis of Mycobacterial species using whole genome sequences."
    Hazbon M.H., Riojas M.A., Damon A.M., Alalade R.O., Cantwell B.J., Monaco A., King S., Sohrabi A.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27294 / TMC 102 / H37RvImported and H37RvImported.

Entry informationi

Entry nameiO50433_MYCTU
AccessioniPrimary (citable) accession number: O50433
Secondary accession number(s): F2GG10, I6Y5T9, Q7D8P3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: June 8, 2016
This is version 123 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.