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Protein
Submitted name:

Sigma-B general stress transcription factor

Gene
N/A
Organism
Bacillus licheniformis
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation, Sigma factorSAAS annotation
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma-B general stress transcription factorImported
OrganismiBacillus licheniformisImported
Taxonomic identifieri1402 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Structurei

3D structure databases

ProteinModelPortaliO50232
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini225 – 251RNA_pol_sigma70InterPro annotationAdd BLAST27

Sequence similaritiesi

Belongs to the sigma-70 factor family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105E65 Bacteria
COG1191 LUCA

Family and domain databases

Gene3Di1.10.10.10, 2 hits
InterProiView protein in InterPro
IPR014284 RNA_pol_sigma-70_dom
IPR014288 RNA_pol_sigma-B
IPR014322 RNA_pol_sigma-B/F/G
IPR000943 RNA_pol_sigma70
IPR007627 RNA_pol_sigma70_r2
IPR007624 RNA_pol_sigma70_r3
IPR007630 RNA_pol_sigma70_r4
IPR013325 RNA_pol_sigma_r2
IPR013324 RNA_pol_sigma_r3/r4-like
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF04542 Sigma70_r2, 1 hit
PF04539 Sigma70_r3, 1 hit
PF04545 Sigma70_r4, 1 hit
PRINTSiPR00046 SIGMA70FCT
SUPFAMiSSF88659 SSF88659, 2 hits
SSF88946 SSF88946, 1 hit
TIGRFAMsiTIGR02980 SigBFG, 1 hit
TIGR02937 sigma70-ECF, 1 hit
TIGR02941 Sigma_B, 1 hit
PROSITEiView protein in PROSITE
PS00716 SIGMA70_2, 1 hit

Sequencei

Sequence statusi: Complete.

O50232-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMMAQPSKTT KLTKTEVDTL IKKYQDSQDE DAQLTLVQTY KNLVETLAKK
60 70 80 90 100
YSKGKSFHED LCQVGMLGLL GAIKRYDPDV GKSFEAFAIP TIIGEIKRFL
110 120 130 140 150
RDKTWSVHVP RRIKELGPRI KMAVDHLTNE TQRSPKVDEI AEFLDVTEEE
160 170 180 190 200
VLETMEMGKS YQALSVDHSI EADADGSTVT ILDIVGSQEE GYEKVNQKLM
210 220 230 240 250
LESVLHVLSD REKQIIELTY IQNKSQKETG DMLGISQMHV SRLQRKAVKK
260
LREALAEDPF MELKP
Length:265
Mass (Da):30,148
Last modified:June 1, 1998 - v1
Checksum:i4AA898A8F6A4C0C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF034567 Genomic DNA Translation: AAC29510.1

Similar proteinsi

Entry informationi

Entry nameiO50232_BACLI
AccessioniPrimary (citable) accession number: O50232
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 25, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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