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Protein
Submitted name:

Amylase

Gene

amy

Organism
Thermococcus sp. Rt3
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
AmylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyImported
OrganismiThermococcus sp. Rt3Imported
Taxonomic identifieri65421 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Structurei

3D structure databases

ProteinModelPortaliO50200.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 389AamyInterPro annotationAdd BLAST345

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

O50200-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAKKLLALL FVLAVLVGVA VIPARVGIAP VSAGATSRPS LEEGGVIMQA
60 70 80 90 100
FYWDVPAGGI WWDTIRSKIP DWASAGISAI WIPPASKGMS GAYSMGYDPY
110 120 130 140 150
DFFDLGEYYQ KGTVETRFGS KQELINMINT AHSYGIKVIA DIVINHRAGG
160 170 180 190 200
DLEWNPFTNS YTWTDFSKVA SGKYTANYLD FHPNEVKCCD EGTFGGFPDI
210 220 230 240 250
AHEKSWDQYW LWASQKSYAA YLRSIGIDAW RFDYVKGYGA WVVKDWLKWW
260 270 280 290 300
ALAVGEYWDT NVDALLNWAY SSGAKVFDFP LYYKMDEAFD NKNIPALVSA
310 320 330 340 350
LQNGQTVVSR DPFKAVTFVA NHDTDIIWNK YPAYAFILTY EGQPVIFYRD
360 370 380 390 400
YEEWLNKDRL KNLIWIHNNL AGGSTSIVYY DNDELIFVRN GYGNKPGLIT
410 420 430 440 450
YINLGSSKVG RWVYVPKFAG SCIHEYTGNL GGWVDKYVGS NGWVYLEAPA
460
HDPAKGQYGY SVWSYCGVG
Length:469
Mass (Da):52,757
Last modified:June 1, 1998 - v1
Checksum:iC3BD614FBA4DB3E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF017454 Genomic DNA. Translation: AAB87860.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF017454 Genomic DNA. Translation: AAB87860.1.

3D structure databases

ProteinModelPortaliO50200.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO50200_9EURY
AccessioniPrimary (citable) accession number: O50200
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: October 5, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.