O50200 (O50200_9EURY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Amylase EMBL AAB87860.1
EC=3.2.1.1 EMBL AAB87860.1

Gene names

Name:

amy EMBL AAB87860.1

Organism

Thermococcus sp. Rt3 EMBL AAB87860.1

Taxonomic identifier

65421 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	469 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL AAB87860.1 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-amylase activity Inferred from electronic annotation. Source: EC calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O50200 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: C3BD614FBA4DB3E2	FASTA	469	52,757
	10 20 30 40 50 60 MSAKKLLALL FVLAVLVGVA VIPARVGIAP VSAGATSRPS LEEGGVIMQA FYWDVPAGGI 70 80 90 100 110 120 WWDTIRSKIP DWASAGISAI WIPPASKGMS GAYSMGYDPY DFFDLGEYYQ KGTVETRFGS 130 140 150 160 170 180 KQELINMINT AHSYGIKVIA DIVINHRAGG DLEWNPFTNS YTWTDFSKVA SGKYTANYLD 190 200 210 220 230 240 FHPNEVKCCD EGTFGGFPDI AHEKSWDQYW LWASQKSYAA YLRSIGIDAW RFDYVKGYGA 250 260 270 280 290 300 WVVKDWLKWW ALAVGEYWDT NVDALLNWAY SSGAKVFDFP LYYKMDEAFD NKNIPALVSA 310 320 330 340 350 360 LQNGQTVVSR DPFKAVTFVA NHDTDIIWNK YPAYAFILTY EGQPVIFYRD YEEWLNKDRL 370 380 390 400 410 420 KNLIWIHNNL AGGSTSIVYY DNDELIFVRN GYGNKPGLIT YINLGSSKVG RWVYVPKFAG 430 440 450 460 SCIHEYTGNL GGWVDKYVGS NGWVYLEAPA HDPAKGQYGY SVWSYCGVG

References

[1]	"Amylase and 16S rRNA genes from a hyperthermophilic archaebacterium." Jones R.A., Jermiin L.S., Easteal S., Patel B.K., Beacham I.R. J. Appl. Microbiol. 86:93-107(1999) [PubMed: 10030014] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Rt3 EMBL AAB87860.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF017454 Genomic DNA. Translation: AAB87860.1.
3D structure databases
HSSP	HSSP built from PDB template 1MXG based on UniProtKB O08452.
ProteinModelPortal	O50200.
SMR	O50200. Positions 41-469.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR013776. A-amylase_thermo. IPR015237. Alpha-amylase_C_pro. IPR015902. Alpha_amylase. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF09154. DUF1939. 1 hit. [Graphical view]
PIRSF	PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTS	PR00110. ALPHAAMYLASE.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O50200_9EURY

Accession

Primary (citable) accession number: O50200

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	May 31, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)