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Protein
Submitted name:

Actin-like ATPase superfamily protein

Gene

T12H17.110

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciARA:AT4G22720-MONOMER.
ARA:GQT-482-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Actin-like ATPase superfamily proteinImported
Submitted name:
Glycoprotein endopeptidase - like proteinImported
Submitted name:
Glycoprotein endopeptidase-like proteinImported
Submitted name:
Putative glycoprotein endopeptidaseImported
Gene namesi
Name:T12H17.110Imported
Ordered Locus Names:At4g22720Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G22720.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
  • EKC/KEOPS complex Source: GO_Central
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G22720.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 305277Peptidase_M22InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2708. Eukaryota.
COG0533. LUCA.
HOGENOMiHOG000109569.
KOiK01409.
OMAiERYCIDN.

Family and domain databases

InterProiIPR000905. Gcp-like_dom.
IPR017861. KAE1/TsaD.
[Graphical view]
PfamiPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSiPR00789. OSIALOPTASE.
TIGRFAMsiTIGR00329. gcp_kae1. 1 hit.

Sequencei

Sequence statusi: Complete.

O49653-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA
60 70 80 90 100
HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
110 120 130 140 150
SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY
160 170 180 190 200
RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
210 220 230 240 250
VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE
260 270 280 290 300
RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
310 320 330 340 350
AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV

AAN
Length:353
Mass (Da):38,768
Last modified:June 1, 1998 - v1
Checksum:i2A9AAB7515936E76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY050841 mRNA. Translation: AAK92776.1.
AY079379 mRNA. Translation: AAL85110.1.
AY088084 mRNA. Translation: AAM65630.1.
CP002687 Genomic DNA. Translation: AEE84643.1.
CP002687 Genomic DNA. Translation: AEE84644.1.
AL021635 Genomic DNA. Translation: CAA16557.1.
AL161557 Genomic DNA. Translation: CAB79227.1.
PIRiT04567.
RefSeqiNP_194003.1. NM_118398.4.
NP_974593.1. NM_202864.1.
UniGeneiAt.1865.

Genome annotation databases

EnsemblPlantsiAT4G22720.1; AT4G22720.1; AT4G22720.
AT4G22720.2; AT4G22720.2; AT4G22720.
GeneIDi828368.
GrameneiAT4G22720.1; AT4G22720.1; AT4G22720.
AT4G22720.2; AT4G22720.2; AT4G22720.
KEGGiath:AT4G22720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY050841 mRNA. Translation: AAK92776.1.
AY079379 mRNA. Translation: AAL85110.1.
AY088084 mRNA. Translation: AAM65630.1.
CP002687 Genomic DNA. Translation: AEE84643.1.
CP002687 Genomic DNA. Translation: AEE84644.1.
AL021635 Genomic DNA. Translation: CAA16557.1.
AL161557 Genomic DNA. Translation: CAB79227.1.
PIRiT04567.
RefSeqiNP_194003.1. NM_118398.4.
NP_974593.1. NM_202864.1.
UniGeneiAt.1865.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G22720.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G22720.1; AT4G22720.1; AT4G22720.
AT4G22720.2; AT4G22720.2; AT4G22720.
GeneIDi828368.
GrameneiAT4G22720.1; AT4G22720.1; AT4G22720.
AT4G22720.2; AT4G22720.2; AT4G22720.
KEGGiath:AT4G22720.

Organism-specific databases

TAIRiAT4G22720.

Phylogenomic databases

eggNOGiKOG2708. Eukaryota.
COG0533. LUCA.
HOGENOMiHOG000109569.
KOiK01409.
OMAiERYCIDN.

Enzyme and pathway databases

BioCyciARA:AT4G22720-MONOMER.
ARA:GQT-482-MONOMER.

Family and domain databases

InterProiIPR000905. Gcp-like_dom.
IPR017861. KAE1/TsaD.
[Graphical view]
PfamiPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSiPR00789. OSIALOPTASE.
TIGRFAMsiTIGR00329. gcp_kae1. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Bevan M., Hilbert H., Braun M., Holzer E., Brandt A., Duesterhoeft A., Bancroft I., Mewes H.W., Mayer K., Schueller C.
    Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. EU Arabidopsis sequencing project
    Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  4. Hilbert H., Braun M., Holzer E., Brandt A., Duesterhoeft A., Mewes H.W., Lemcke K., Mayer K.F.X.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. EU Arabidopsis sequencing project
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. Cited for: NUCLEOTIDE SEQUENCE.
  7. "Full-length messenger RNA sequences greatly improve genome annotation."
    Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
    Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  8. "Arabidopsis Open Reading Frame (ORF) Clones."
    Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J.
    , Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
    Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
    Plant Mol. Biol. 60:71-87(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
  11. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  12. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiO49653_ARATH
AccessioniPrimary (citable) accession number: O49653
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: July 6, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.