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Protein

Transcription factor MYB32

Gene

MYB32

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi37 – 61H-T-H motifPROSITE-ProRule annotationAdd BLAST25
DNA bindingi89 – 112H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

  • cell differentiation Source: GO_Central
  • regulation of transcription from RNA polymerase II promoter Source: GO_Central
  • response to abscisic acid Source: TAIR
  • response to cadmium ion Source: TAIR
  • response to ethylene Source: TAIR
  • response to jasmonic acid Source: TAIR
  • response to salicylic acid Source: TAIR
  • response to salt stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor MYB32
Alternative name(s):
Myb-related protein 32
Short name:
AtMYB32
Gene namesi
Name:MYB32
Ordered Locus Names:At4g34990
ORF Names:M4E13.50
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G34990.
TAIRilocus:2131576. AT4G34990.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003588331 – 274Transcription factor MYB32Add BLAST274

Proteomic databases

PaxDbiO49608.

Expressioni

Tissue specificityi

Mostly expressed in roots, and, to a lower extent, in stems, flower buds, and siliques.1 Publication

Inductioni

By light, UV, cold, drought, ethylene, jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), cadmium (CdCl2), high salt (NaCl), and cytokinins.2 Publications

Gene expression databases

GenevisibleiO49608. AT.

Interactioni

Protein-protein interaction databases

BioGridi14933. 5 interactors.
IntActiO49608. 7 interactors.
STRINGi3702.AT4G34990.1.

Structurei

3D structure databases

ProteinModelPortaliO49608.
SMRiO49608.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 61HTH myb-type 1PROSITE-ProRule annotationAdd BLAST53
Domaini62 – 116HTH myb-type 2PROSITE-ProRule annotationAdd BLAST55

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0048. Eukaryota.
COG5147. LUCA.
HOGENOMiHOG000237600.
InParanoidiO49608.
KOiK09422.
OMAiNLELRIC.
OrthoDBiEOG09360KJ0.
PhylomeDBiO49608.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017930. Myb_dom.
IPR001005. SANT/Myb.
PfamiView protein in Pfam
PF00249. Myb_DNA-binding. 2 hits.
SMARTiView protein in SMART
SM00717. SANT. 2 hits.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS51294. HTH_MYB. 2 hits.

Sequencei

Sequence statusi: Complete.

O49608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG
60 70 80 90 100
KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
110 120 130 140 150
DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK
160 170 180 190 200
ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
210 220 230 240 250
DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS
260 270
SSIGYDFLGL NNTRVLDFST LEMK
Length:274
Mass (Da):31,458
Last modified:June 1, 1998 - v1
Checksum:i817C0609F7DB5517
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti140D → V in AAC83596 (PubMed:9839469).Curated1
Sequence conflicti199L → F in AAF13100 (Ref. 1) Curated1
Sequence conflicti212Y → H in AAF13100 (Ref. 1) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U26933 Genomic DNA. Translation: AAF13100.1.
AY519612 mRNA. Translation: AAS10082.1.
AL022023 Genomic DNA. Translation: CAA17764.1.
AL161586 Genomic DNA. Translation: CAB80216.1.
CP002687 Genomic DNA. Translation: AEE86444.1.
BT024907 mRNA. Translation: ABD91498.1.
Z95756 mRNA. Translation: CAB09188.1.
AF062874 mRNA. Translation: AAC83596.1.
PIRiT05769.
T51646.
RefSeqiNP_195225.1. NM_119665.3.
UniGeneiAt.28679.

Genome annotation databases

EnsemblPlantsiAT4G34990.1; AT4G34990.1; AT4G34990.
GeneIDi829651.
GrameneiAT4G34990.1; AT4G34990.1; AT4G34990.
KEGGiath:AT4G34990.

Similar proteinsi

Entry informationi

Entry nameiMYB32_ARATH
AccessioniPrimary (citable) accession number: O49608
Secondary accession number(s): Q9SAM5, Q9SBG2, Q9SM28
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: June 1, 1998
Last modified: September 27, 2017
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names