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Protein

Transcription factor MYB32

Gene

MYB32

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi37 – 6125H-T-H motifPROSITE-ProRule annotationAdd
BLAST
DNA bindingi89 – 11224H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • response to abscisic acid Source: TAIR
  • response to cadmium ion Source: TAIR
  • response to ethylene Source: TAIR
  • response to jasmonic acid Source: TAIR
  • response to salicylic acid Source: TAIR
  • response to salt stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor MYB32
Alternative name(s):
Myb-related protein 32
Short name:
AtMYB32
Gene namesi
Name:MYB32
Ordered Locus Names:At4g34990
ORF Names:M4E13.50
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G34990.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 274274Transcription factor MYB32PRO_0000358833Add
BLAST

Proteomic databases

PaxDbiO49608.
PRIDEiO49608.

Expressioni

Tissue specificityi

Mostly expressed in roots, and, to a lower extent, in stems, flower buds, and siliques.1 Publication

Inductioni

By light, UV, cold, drought, ethylene, jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), cadmium (CdCl2), high salt (NaCl), and cytokinins.2 Publications

Gene expression databases

GenevisibleiO49608. AT.

Interactioni

Protein-protein interaction databases

BioGridi14933. 4 interactions.
STRINGi3702.AT4G34990.1.

Structurei

3D structure databases

ProteinModelPortaliO49608.
SMRiO49608. Positions 14-116.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 6153HTH myb-type 1PROSITE-ProRule annotationAdd
BLAST
Domaini62 – 11655HTH myb-type 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 HTH myb-type DNA-binding domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0048. Eukaryota.
COG5147. LUCA.
HOGENOMiHOG000237600.
InParanoidiO49608.
KOiK09422.
OMAiATHRPIN.
OrthoDBiEOG09360KJ0.
PhylomeDBiO49608.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR001005. SANT/Myb.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 2 hits.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS51294. HTH_MYB. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O49608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG
60 70 80 90 100
KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
110 120 130 140 150
DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK
160 170 180 190 200
ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
210 220 230 240 250
DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS
260 270
SSIGYDFLGL NNTRVLDFST LEMK
Length:274
Mass (Da):31,458
Last modified:June 1, 1998 - v1
Checksum:i817C0609F7DB5517
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti140 – 1401D → V in AAC83596 (PubMed:9839469).Curated
Sequence conflicti199 – 1991L → F in AAF13100 (Ref. 1) Curated
Sequence conflicti212 – 2121Y → H in AAF13100 (Ref. 1) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U26933 Genomic DNA. Translation: AAF13100.1.
AY519612 mRNA. Translation: AAS10082.1.
AL022023 Genomic DNA. Translation: CAA17764.1.
AL161586 Genomic DNA. Translation: CAB80216.1.
CP002687 Genomic DNA. Translation: AEE86444.1.
BT024907 mRNA. Translation: ABD91498.1.
Z95756 mRNA. Translation: CAB09188.1.
AF062874 mRNA. Translation: AAC83596.1.
PIRiT05769.
T51646.
RefSeqiNP_195225.1. NM_119665.2.
UniGeneiAt.28679.

Genome annotation databases

EnsemblPlantsiAT4G34990.1; AT4G34990.1; AT4G34990.
GeneIDi829651.
GrameneiAT4G34990.1; AT4G34990.1; AT4G34990.
KEGGiath:AT4G34990.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U26933 Genomic DNA. Translation: AAF13100.1.
AY519612 mRNA. Translation: AAS10082.1.
AL022023 Genomic DNA. Translation: CAA17764.1.
AL161586 Genomic DNA. Translation: CAB80216.1.
CP002687 Genomic DNA. Translation: AEE86444.1.
BT024907 mRNA. Translation: ABD91498.1.
Z95756 mRNA. Translation: CAB09188.1.
AF062874 mRNA. Translation: AAC83596.1.
PIRiT05769.
T51646.
RefSeqiNP_195225.1. NM_119665.2.
UniGeneiAt.28679.

3D structure databases

ProteinModelPortaliO49608.
SMRiO49608. Positions 14-116.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi14933. 4 interactions.
STRINGi3702.AT4G34990.1.

Proteomic databases

PaxDbiO49608.
PRIDEiO49608.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G34990.1; AT4G34990.1; AT4G34990.
GeneIDi829651.
GrameneiAT4G34990.1; AT4G34990.1; AT4G34990.
KEGGiath:AT4G34990.

Organism-specific databases

TAIRiAT4G34990.

Phylogenomic databases

eggNOGiKOG0048. Eukaryota.
COG5147. LUCA.
HOGENOMiHOG000237600.
InParanoidiO49608.
KOiK09422.
OMAiATHRPIN.
OrthoDBiEOG09360KJ0.
PhylomeDBiO49608.

Miscellaneous databases

PROiO49608.

Gene expression databases

GenevisibleiO49608. AT.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR001005. SANT/Myb.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 2 hits.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS51294. HTH_MYB. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMYB32_ARATH
AccessioniPrimary (citable) accession number: O49608
Secondary accession number(s): Q9SAM5, Q9SBG2, Q9SM28
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: June 1, 1998
Last modified: September 7, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.