Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Transcription factor MYB32

Gene

MYB32

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi37 – 61H-T-H motifPROSITE-ProRule annotationAdd BLAST25
DNA bindingi89 – 112H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

  • cell differentiation Source: GO_Central
  • regulation of transcription by RNA polymerase II Source: GO_Central
  • response to abscisic acid Source: TAIR
  • response to cadmium ion Source: TAIR
  • response to ethylene Source: TAIR
  • response to jasmonic acid Source: TAIR
  • response to salicylic acid Source: TAIR
  • response to salt stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor MYB32
Alternative name(s):
Myb-related protein 32
Short name:
AtMYB32
Gene namesi
Name:MYB32
Ordered Locus Names:At4g34990
ORF Names:M4E13.50
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G34990
TAIRilocus:2131576 AT4G34990

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003588331 – 274Transcription factor MYB32Add BLAST274

Proteomic databases

PaxDbiO49608

Expressioni

Tissue specificityi

Mostly expressed in roots, and, to a lower extent, in stems, flower buds, and siliques.1 Publication

Inductioni

By light, UV, cold, drought, ethylene, jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), cadmium (CdCl2), high salt (NaCl), and cytokinins.2 Publications

Gene expression databases

ExpressionAtlasiO49608 baseline and differential
GenevisibleiO49608 AT

Interactioni

Protein-protein interaction databases

BioGridi149335 interactors.
IntActiO49608 7 interactors.
STRINGi3702.AT4G34990.1

Structurei

3D structure databases

ProteinModelPortaliO49608
SMRiO49608
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 61HTH myb-type 1PROSITE-ProRule annotationAdd BLAST53
Domaini62 – 116HTH myb-type 2PROSITE-ProRule annotationAdd BLAST55

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0048 Eukaryota
COG5147 LUCA
HOGENOMiHOG000237600
InParanoidiO49608
KOiK09422
OMAiFGNGKEC
OrthoDBiEOG09360KJ0
PhylomeDBiO49608

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017930 Myb_dom
IPR001005 SANT/Myb
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 2 hits
SMARTiView protein in SMART
SM00717 SANT, 2 hits
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 2 hits

Sequencei

Sequence statusi: Complete.

O49608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG
60 70 80 90 100
KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
110 120 130 140 150
DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK
160 170 180 190 200
ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
210 220 230 240 250
DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS
260 270
SSIGYDFLGL NNTRVLDFST LEMK
Length:274
Mass (Da):31,458
Last modified:June 1, 1998 - v1
Checksum:i817C0609F7DB5517
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti140D → V in AAC83596 (PubMed:9839469).Curated1
Sequence conflicti199L → F in AAF13100 (Ref. 1) Curated1
Sequence conflicti212Y → H in AAF13100 (Ref. 1) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U26933 Genomic DNA Translation: AAF13100.1
AY519612 mRNA Translation: AAS10082.1
AL022023 Genomic DNA Translation: CAA17764.1
AL161586 Genomic DNA Translation: CAB80216.1
CP002687 Genomic DNA Translation: AEE86444.1
BT024907 mRNA Translation: ABD91498.1
Z95756 mRNA Translation: CAB09188.1
AF062874 mRNA Translation: AAC83596.1
PIRiT05769
T51646
RefSeqiNP_195225.1, NM_119665.3
UniGeneiAt.28679

Genome annotation databases

EnsemblPlantsiAT4G34990.1; AT4G34990.1; AT4G34990
GeneIDi829651
GrameneiAT4G34990.1; AT4G34990.1; AT4G34990
KEGGiath:AT4G34990

Similar proteinsi

Entry informationi

Entry nameiMYB32_ARATH
AccessioniPrimary (citable) accession number: O49608
Secondary accession number(s): Q9SAM5, Q9SBG2, Q9SM28
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: June 1, 1998
Last modified: April 25, 2018
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome