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Protein
Submitted name:

AT4g21110/F7J7_50

Gene

F7J7.50

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
AT4g21110/F7J7_50Imported
Submitted name:
At4g21110/F7J7_50Imported
Submitted name:
G10 family proteinImported
Submitted name:
G10-like proteinImported
Gene namesi
Name:F7J7.50Imported
Ordered Locus Names:At4g21110Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G21110.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
  • spliceosomal complex Source: GO_Central
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G21110.1.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3404. Eukaryota.
COG5132. LUCA.
HOGENOMiHOG000235066.
KOiK12873.
OMAiCRGCSSD.

Family and domain databases

InterProiIPR018230. BUD31/G10-rel_CS.
IPR001748. G10.
[Graphical view]
PANTHERiPTHR19411. PTHR19411. 1 hit.
PfamiPF01125. G10. 1 hit.
[Graphical view]
PRINTSiPR00322. G10.
PROSITEiPS00997. G10_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O49553-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKVKTNRVK YPEGWELIEP TLRELDAKMR EAETDSHDGK RKCETLWPIF
60 70 80 90 100
KVSHQRSRYV YDLYYRREEI SKELYEFCLD QGYADRSLIA KWKKSGYERL
110 120 130 140
CCLRCIQPRD HNYGTTCVCR VPKHLREEKV VECVHCGCQG CASGD
Length:145
Mass (Da):17,187
Last modified:June 1, 1998 - v1
Checksum:i1E5EA0A25B0C7B60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF410327 mRNA. Translation: AAK95313.1.
BT000541 mRNA. Translation: AAN18110.1.
CP002687 Genomic DNA. Translation: AEE84404.1.
AL021960 Genomic DNA. Translation: CAA17530.1.
AL161554 Genomic DNA. Translation: CAB79111.1.
PIRiT04942.
RefSeqiNP_193843.1. NM_118230.3.
UniGeneiAt.2072.

Genome annotation databases

EnsemblPlantsiAT4G21110.1; AT4G21110.1; AT4G21110.
GeneIDi827859.
GrameneiAT4G21110.1; AT4G21110.1; AT4G21110.
KEGGiath:AT4G21110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF410327 mRNA. Translation: AAK95313.1.
BT000541 mRNA. Translation: AAN18110.1.
CP002687 Genomic DNA. Translation: AEE84404.1.
AL021960 Genomic DNA. Translation: CAA17530.1.
AL161554 Genomic DNA. Translation: CAB79111.1.
PIRiT04942.
RefSeqiNP_193843.1. NM_118230.3.
UniGeneiAt.2072.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G21110.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G21110.1; AT4G21110.1; AT4G21110.
GeneIDi827859.
GrameneiAT4G21110.1; AT4G21110.1; AT4G21110.
KEGGiath:AT4G21110.

Organism-specific databases

TAIRiAT4G21110.

Phylogenomic databases

eggNOGiKOG3404. Eukaryota.
COG5132. LUCA.
HOGENOMiHOG000235066.
KOiK12873.
OMAiCRGCSSD.

Family and domain databases

InterProiIPR018230. BUD31/G10-rel_CS.
IPR001748. G10.
[Graphical view]
PANTHERiPTHR19411. PTHR19411. 1 hit.
PfamiPF01125. G10. 1 hit.
[Graphical view]
PRINTSiPR00322. G10.
PROSITEiPS00997. G10_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Bevan M., Murphy G., Ridley P., Hudson S., Bancroft I., Mewes H.W., Mayer K.F.X., Schueller C.
    Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  3. EU Arabidopsis sequencing project
    Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. Murphy G., Ridley P., Hudson S., Mewes H.W., Lemcke K., Mayer K.F.X.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. EU Arabidopsis sequencing project
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. Cited for: NUCLEOTIDE SEQUENCE.
  7. Cited for: NUCLEOTIDE SEQUENCE.
  8. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiO49553_ARATH
AccessioniPrimary (citable) accession number: O49553
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: July 6, 2016
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.