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O49549

- O49549_ARATH

UniProt

O49549 - O49549_ARATH

Protein
Submitted name:

Putative uncharacterized protein F7J7.10

Gene

F7J7.10

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 87 (01 Oct 2014)
      Sequence version 2 (01 Nov 1998)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein F7J7.10Imported
    Gene namesi
    Name:F7J7.10Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

    PTM / Processingi

    Proteomic databases

    PRIDEiO49549.

    Expressioni

    Gene expression databases

    GenevestigatoriO49549.

    Structurei

    3D structure databases

    ProteinModelPortaliO49549.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Zinc-fingerUniRule annotation

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR002885. Pentatricopeptide_repeat.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view]
    PfamiPF00533. BRCT. 2 hits.
    PF01535. PPR. 4 hits.
    PF13639. zf-RING_2. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    SM00184. RING. 1 hit.
    [Graphical view]
    SUPFAMiSSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00756. PPR. 2 hits.
    PROSITEiPS50172. BRCT. 2 hits.
    PS51375. PPR. 6 hits.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    O49549-1 [UniParc]FASTAAdd to Basket

    « Hide

    IKPDGFTIVS LLSACAKIGA LTLGKRVHVY MIKVGLTRNL HSSNVLLDLY     50
    ARCGRVEEAK TLFDEMVDKN SVSWTSLIVG LAVNGFGKEA IELFKYMEST 100
    EGLLPCEITF VGILYACSHC GMVKEGFEYF RRMREEYKIE PRIEHFGCMV 150
    DLLARAGQVK KAYEYIKSMP MQPNVVIWRT LLGACTVHGD SDLAEFARIQ 200
    ILQLEPNHSG DYVLLSNMYA SEQRWSDVQK IRKQMLRDGV KKVPGHSLVE 250
    VGNRVHEFLM GDKSHPQSDA IYAKLKEMTG RLRSEGYVPQ ISNVYVDVEE 300
    EEKENAVVYH SEKIAIAFML ISTPERSPIT VVKNLRVCAD CHLAIKLVSK 350
    VYNREIVVRD RSRSKMADTS HLERMGRELK CPICLSLYNS AVSLSCNHVF 400
    CNACIVKSMK MDATCPVCKI PYHRREIRGA PHMDSLVSIY KNMEDASGIK 450
    LFVSQNNPSP SDKEKQVRDA SVEKASDKNR QGSRKGRASK RNEYGKTKEI 500
    DVDAPGPIVM KPSSQTKKRV QLLQNLSAES LTKPTESVET AEKPKDYTEN 550
    TVIRLDEHPS LNKEGNLSPF FWLRDEDDGE NSSQRTESDQ LLGTTPVNVP 600
    SFSDLMDSDH ESPSKEDEQQ KPNPGDMFDS EMFEWTQRPC SPEILPSPVK 650
    AKVLGRDEID LTQKKLPKVK VASSKCKNRK AGSARNTVAR RSIGVSQEDN 700
    MESSAAATIS EQQDSRGTSG TIIRNDVNTD ENVKAKRATR SKAQSTRVQS 750
    DLNVSNEADG KQGTKRKRSS IKSSPAHPIA GPNELSLGTE IVGKGDQDQA 800
    HGPSDTHPEK RSPTEKPSLK KRGRKSNASS SLKDLSGKTQ KKTSEKKLKL 850
    DSHMISSKAT QPHGNGILTA GLNQGGDKQD SRNNRKSTVG KDDHTMQVIE 900
    KCSTINKSSS GGSAHLRRCN GSLTKKFTCA FCQCSEDTEA SGEMTHYYRG 950
    EPVSADFNGG SKVIHVHKNC AEWAPNVYFN DLTIVNLDVE LTRSRRISCS 1000
    CCGLKGAALG CYNKSCKNSF HVTCAKLIPE CRWDNVSVAY IVEALYSPLH 1050
    SSFNTFSYQQ VKFVMLCPLD ASIKLPCEEA NSKDRKCKRT PKEPLHSQPK 1100
    QVSGKANIRE LHIKQFHGFS KKLVLSCSGL TVEEKTVIAE FAELSGVTIS 1150
    KNWDSTVTHV IASINENGAC KRTLKFMMAI LEGKWILTID WIKACMKNTK 1200
    YVSEEPYEIT MDVHGIREGP YLGRQRALKK KPKLFTGLKF YIMGDFELAY 1250
    KGYLQDLIVA AGGTILRRRP VSSDDNEAST IVVFSVEPSK KKTLTQRRSD 1300
    AEALAKSARA RAASSSWVLD SIAGCQILVL I 1331
    Length:1,331
    Mass (Da):148,109
    Last modified:November 1, 1998 - v2
    Checksum:i1FD980FA6DB4B08D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL021960 Genomic DNA. Translation: CAA17526.1.
    PIRiT04938.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL021960 Genomic DNA. Translation: CAA17526.1 .
    PIRi T04938.

    3D structure databases

    ProteinModelPortali O49549.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi O49549.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Gene expression databases

    Genevestigatori O49549.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR002885. Pentatricopeptide_repeat.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view ]
    Pfami PF00533. BRCT. 2 hits.
    PF01535. PPR. 4 hits.
    PF13639. zf-RING_2. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    SM00184. RING. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00756. PPR. 2 hits.
    PROSITEi PS50172. BRCT. 2 hits.
    PS51375. PPR. 6 hits.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
      EU, CSHL and WU Arabidopsis Sequencing Project
      Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
      , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
      Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiO49549_ARATH
    AccessioniPrimary (citable) accession number: O49549
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 1998
    Last sequence update: November 1, 1998
    Last modified: October 1, 2014
    This is version 87 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)