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O49549

- O49549_ARATH

UniProt

O49549 - O49549_ARATH

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Protein
Submitted name:

Putative uncharacterized protein F7J7.10

Gene
F7J7.10
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein F7J7.10Imported
Gene namesi
Name:F7J7.10Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

PTM / Processingi

Proteomic databases

PRIDEiO49549.

Expressioni

Gene expression databases

GenevestigatoriO49549.

Structurei

3D structure databases

ProteinModelPortaliO49549.

Family & Domainsi

Keywords - Domaini

Zinc-fingerUniRule annotation

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR002885. Pentatricopeptide_repeat.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
PfamiPF00533. BRCT. 2 hits.
PF01535. PPR. 4 hits.
PF13639. zf-RING_2. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
SM00184. RING. 1 hit.
[Graphical view]
SUPFAMiSSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00756. PPR. 2 hits.
PROSITEiPS50172. BRCT. 2 hits.
PS51375. PPR. 6 hits.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

O49549-1 [UniParc]FASTAAdd to Basket

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IKPDGFTIVS LLSACAKIGA LTLGKRVHVY MIKVGLTRNL HSSNVLLDLY     50
ARCGRVEEAK TLFDEMVDKN SVSWTSLIVG LAVNGFGKEA IELFKYMEST 100
EGLLPCEITF VGILYACSHC GMVKEGFEYF RRMREEYKIE PRIEHFGCMV 150
DLLARAGQVK KAYEYIKSMP MQPNVVIWRT LLGACTVHGD SDLAEFARIQ 200
ILQLEPNHSG DYVLLSNMYA SEQRWSDVQK IRKQMLRDGV KKVPGHSLVE 250
VGNRVHEFLM GDKSHPQSDA IYAKLKEMTG RLRSEGYVPQ ISNVYVDVEE 300
EEKENAVVYH SEKIAIAFML ISTPERSPIT VVKNLRVCAD CHLAIKLVSK 350
VYNREIVVRD RSRSKMADTS HLERMGRELK CPICLSLYNS AVSLSCNHVF 400
CNACIVKSMK MDATCPVCKI PYHRREIRGA PHMDSLVSIY KNMEDASGIK 450
LFVSQNNPSP SDKEKQVRDA SVEKASDKNR QGSRKGRASK RNEYGKTKEI 500
DVDAPGPIVM KPSSQTKKRV QLLQNLSAES LTKPTESVET AEKPKDYTEN 550
TVIRLDEHPS LNKEGNLSPF FWLRDEDDGE NSSQRTESDQ LLGTTPVNVP 600
SFSDLMDSDH ESPSKEDEQQ KPNPGDMFDS EMFEWTQRPC SPEILPSPVK 650
AKVLGRDEID LTQKKLPKVK VASSKCKNRK AGSARNTVAR RSIGVSQEDN 700
MESSAAATIS EQQDSRGTSG TIIRNDVNTD ENVKAKRATR SKAQSTRVQS 750
DLNVSNEADG KQGTKRKRSS IKSSPAHPIA GPNELSLGTE IVGKGDQDQA 800
HGPSDTHPEK RSPTEKPSLK KRGRKSNASS SLKDLSGKTQ KKTSEKKLKL 850
DSHMISSKAT QPHGNGILTA GLNQGGDKQD SRNNRKSTVG KDDHTMQVIE 900
KCSTINKSSS GGSAHLRRCN GSLTKKFTCA FCQCSEDTEA SGEMTHYYRG 950
EPVSADFNGG SKVIHVHKNC AEWAPNVYFN DLTIVNLDVE LTRSRRISCS 1000
CCGLKGAALG CYNKSCKNSF HVTCAKLIPE CRWDNVSVAY IVEALYSPLH 1050
SSFNTFSYQQ VKFVMLCPLD ASIKLPCEEA NSKDRKCKRT PKEPLHSQPK 1100
QVSGKANIRE LHIKQFHGFS KKLVLSCSGL TVEEKTVIAE FAELSGVTIS 1150
KNWDSTVTHV IASINENGAC KRTLKFMMAI LEGKWILTID WIKACMKNTK 1200
YVSEEPYEIT MDVHGIREGP YLGRQRALKK KPKLFTGLKF YIMGDFELAY 1250
KGYLQDLIVA AGGTILRRRP VSSDDNEAST IVVFSVEPSK KKTLTQRRSD 1300
AEALAKSARA RAASSSWVLD SIAGCQILVL I 1331
Length:1,331
Mass (Da):148,109
Last modified:November 1, 1998 - v2
Checksum:i1FD980FA6DB4B08D
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL021960 Genomic DNA. Translation: CAA17526.1.
PIRiT04938.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL021960 Genomic DNA. Translation: CAA17526.1 .
PIRi T04938.

3D structure databases

ProteinModelPortali O49549.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi O49549.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Gene expression databases

Genevestigatori O49549.

Family and domain databases

Gene3Di 3.30.40.10. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR002885. Pentatricopeptide_repeat.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view ]
Pfami PF00533. BRCT. 2 hits.
PF01535. PPR. 4 hits.
PF13639. zf-RING_2. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
SM00184. RING. 1 hit.
[Graphical view ]
SUPFAMi SSF52113. SSF52113. 2 hits.
TIGRFAMsi TIGR00756. PPR. 2 hits.
PROSITEi PS50172. BRCT. 2 hits.
PS51375. PPR. 6 hits.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiO49549_ARATH
AccessioniPrimary (citable) accession number: O49549
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: November 1, 1998
Last modified: April 16, 2014
This is version 86 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)