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Protein

Putative F-box/kelch-repeat protein At4g34170

Gene

At4g34170

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At4g34170
Gene namesi
Ordered Locus Names:At4g34170
ORF Names:F10M10.1
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G34170.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002832511 – 293Putative F-box/kelch-repeat protein At4g34170Add BLAST293

Proteomic databases

PaxDbiO49488.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G34170.1.

Structurei

3D structure databases

ProteinModelPortaliO49488.
SMRiO49488.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 55F-boxAdd BLAST47
Repeati94 – 140Kelch 1Add BLAST47
Repeati141 – 187Kelch 2Add BLAST47
Repeati226 – 272Kelch 3Add BLAST47

Sequence similaritiesi

Contains 1 F-box domain.Curated
Contains 3 Kelch repeats.Curated

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO49488.
OrthoDBiEOG09360GEW.
PhylomeDBiO49488.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR001810. F-box_dom.
IPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.

Sequencei

Sequence statusi: Complete.

O49488-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDGEELPVK TMLMLHDDLI LNCLARVSRS NHPTLSLVCK RFHSLLASVE
60 70 80 90 100
LYQTRTLLGR TERCFYRQYS SRKILVQILS PNSTSAGIAV VGPNIDAIGG
110 120 130 140 150
GIKSNTLSSV MVMDSRSHTW REAPSMRVPR MFPSVCTLDG KIYVMGGCDN
160 170 180 190 200
LDSTNWMEVF DTKTQTWEFL QIPSEEIFGG SAYESVRYEG TVYVWSEKKD
210 220 230 240 250
VTYKLHEGRW SAADMSANGW GWPGSSYCVI ENVLYSCFVH KIRWYDPKER
260 270 280 290
VWTPLKGLPS LPCNGHVKLA DYGEKMVILW EKYVDVDEKK MIW
Length:293
Mass (Da):33,448
Last modified:June 1, 1998 - v1
Checksum:i50499260E168800E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021961 Genomic DNA. Translation: CAA17555.1.
AL161585 Genomic DNA. Translation: CAB80134.1.
CP002687 Genomic DNA. Translation: AEE86336.1.
PIRiT05419.
RefSeqiNP_195143.1. NM_119580.1.
UniGeneiAt.54597.

Genome annotation databases

EnsemblPlantsiAT4G34170.1; AT4G34170.1; AT4G34170.
GeneIDi829565.
GrameneiAT4G34170.1; AT4G34170.1; AT4G34170.
KEGGiath:AT4G34170.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021961 Genomic DNA. Translation: CAA17555.1.
AL161585 Genomic DNA. Translation: CAB80134.1.
CP002687 Genomic DNA. Translation: AEE86336.1.
PIRiT05419.
RefSeqiNP_195143.1. NM_119580.1.
UniGeneiAt.54597.

3D structure databases

ProteinModelPortaliO49488.
SMRiO49488.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G34170.1.

Proteomic databases

PaxDbiO49488.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G34170.1; AT4G34170.1; AT4G34170.
GeneIDi829565.
GrameneiAT4G34170.1; AT4G34170.1; AT4G34170.
KEGGiath:AT4G34170.

Organism-specific databases

TAIRiAT4G34170.

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO49488.
OrthoDBiEOG09360GEW.
PhylomeDBiO49488.

Miscellaneous databases

PROiO49488.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR001810. F-box_dom.
IPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiFBK93_ARATH
AccessioniPrimary (citable) accession number: O49488
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: June 1, 1998
Last modified: November 2, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.