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Protein
Submitted name:

Disease resistance protein (TIR-NBS-LRR class) family

Gene

At4g19530

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • defense response signaling pathway, resistance gene-dependent Source: TAIR

Names & Taxonomyi

Protein namesi
Submitted name:
Disease resistance protein (TIR-NBS-LRR class) familyImported
Submitted name:
TMV resistance protein N-likeImported
Gene namesi
Ordered Locus Names:At4g19530Imported
ORF Names:F24J7.90Imported, F24J7_90Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G19530
TAIRilocus:2122985 AT4G19530

Expressioni

Gene expression databases

ExpressionAtlasiO49471 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G19530.1

Structurei

3D structure databases

SMRiO49471
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 148TIRInterPro annotationAdd BLAST136

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili198 – 225Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Leucine-rich repeatSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

HOGENOMiHOG000064702
OMAiMIYISDS
OrthoDBiEOG093616OE

Family and domain databases

Gene3Di3.40.50.10140, 1 hit
3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR011713 Leu-rich_rpt_3
IPR032675 LRR_dom_sf
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR000157 TIR_dom
IPR035897 Toll_tir_struct_dom_sf
PfamiView protein in Pfam
PF07725 LRR_3, 1 hit
PF00931 NB-ARC, 1 hit
PF01582 TIR, 1 hit
SMARTiView protein in SMART
SM00255 TIR, 1 hit
SUPFAMiSSF52200 SSF52200, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50104 TIR, 1 hit

Sequencei

Sequence statusi: Complete.

O49471-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSSSVVSS VPQQHQVFLN FRGDELRNNF VSHLDKALRG KQINVFIDEA
60 70 80 90 100
VEKGENLDNL FKEIEKSRIA LAIISQKYTE SKWCLNELVK MKELEGKLVT
110 120 130 140 150
IPIFYNVEPA TVRYQKEAFG AALTKTQEND SDGQMKKWKE ALTYVSLLVG
160 170 180 190 200
FPFNSKSKEK ETTLIDKIVD AVLQKLSKIS SEESTSGSVD QGRGEEVEEA
210 220 230 240 250
KADKISGLNQ RLKELEEKVA ITGDKRDETR IVEVVGMPGI GKSTLLKAFY
260 270 280 290 300
ETWKTRFLSS ALLQNISELV KAMGLGRLTG MLLKELLPDE NIDEETYEPY
310 320 330 340 350
KEKLLKNTVF IVLDGISDET HIQKLLKDHR KWAKKGSKIV IARRAVTRDL
360 370 380 390 400
LHEDSMVRYT YFVPLLSHRD GLNHFCHYAF RHFAAHQNNK EAFMKESKEF
410 420 430 440 450
VRYARGHPLI LKLLGEELRE KSLSYWEEKL KSLPKSLSQN IRDRVLQVTY
460 470 480 490 500
DELSQVQKDA FLDIACFRSH DLVYVKSLLD SSGPAFSKAT VTIDALKDMF
510 520 530 540 550
MIYISDSRVE MHDLLYTFAM ELGPEARDDD GRGRHRIWHH HNQDNKGRLN
560 570 580 590 600
RLLKRPGGST SVRSFFLDMY VMKTDVTLGT DYLKNMRNLR YLKFYSSHCP
610 620 630 640 650
QECTPKENIH IPGELELPLE EVRCLHWLNF PKDELPQDFI PKNLVDLKLP
660 670 680 690 700
YSKIRQIWRE EKDAPKLRWV DLNHSSKLEN LSGLSQALNL ERLNLEGCTA
710 720 730 740 750
LKTLLLGPEN MASLVFLNLK GCTGLESLPK INLRSLKTLI LSNCSNLEEF
760 770 780 790 800
WVISETLYTL YLDGTAIKTL PQDMVKLTSL VKLYMKDCEM LVKLPEEFDK
810 820 830 840 850
LKVLQELVCS GCKRLSSLPD VMKNMQCLQI LLLDGTAITK IPHISSLERL
860 870 880 890 900
CLSRNEKISC LSNDIRLLSQ LKWLDLKYCT KLVSIPELPT NLQCLDANGC
910 920 930 940 950
ESLTTVANPL ATHLPTEQIH STFIFTNCDK LDRTAKEGFV PEALFSTCFP
960 970 980 990 1000
GCEVPSWFCH EAVGSVLKLN LLPHWNENRF VGIALCAVVG SLPNCQEQTN
1010 1020 1030 1040 1050
SCSVTCTFNI ASKDSKKGDP YKISFDRLVG RWNKHGNKLD KKGNKLKKTE
1060 1070 1080 1090 1100
SDHVFICYTR CSNSIKCLQD QHSGTCTPTE AFLEFGVTDK ESRLEVLKCG
1110 1120 1130 1140 1150
LRLVYASDEP QKTNSDMDLS LSSSDSTPTR NGSSNTTTSS GSVSTNTIRE
1160
EDSNILHEAQ SQNGRGL
Length:1,167
Mass (Da):132,506
Last modified:June 1, 1998 - v1
Checksum:i754C23DBBC953D5A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA Translation: AEE84195.1
AL021768 Genomic DNA Translation: CAA16930.1
AL161551 Genomic DNA Translation: CAB78955.1
PIRiT06146
RefSeqiNP_193688.1, NM_118073.2
UniGeneiAt.32809

Genome annotation databases

EnsemblPlantsiAT4G19530.1; AT4G19530.1; AT4G19530
GeneIDi827695
GrameneiAT4G19530.1; AT4G19530.1; AT4G19530

Similar proteinsi

Entry informationi

Entry nameiO49471_ARATH
AccessioniPrimary (citable) accession number: O49471
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 23, 2018
This is version 145 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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