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Protein
Submitted name:

TMV resistance protein N-like

Gene

F24J7.70

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
TMV resistance protein N-likeImported
Gene namesi
Name:F24J7.70Imported
Ordered Locus Names:At4g19510Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Organism-specific databases

TAIRiAT4G19510.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei1101 – 112222HelicalSequence analysisAdd
BLAST
Transmembranei1142 – 116322HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

ProMEXiO49469.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G19510.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 161140TIRInterPro annotationAdd
BLAST

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J8UW. Eukaryota.
ENOG4112BMQ. LUCA.
HOGENOMiHOG000064702.
PhylomeDBiO49469.

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR011713. Leu-rich_rpt_3.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07725. LRR_3. 1 hit.
PF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52058. SSF52058. 1 hit.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O49469-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGILGICIIT NHLDGDRVLS KCEFDVFVSF RGADTRHDFT SHLVKYLRGK
60 70 80 90 100
GIDVFSDAKL RGGEYISLLF DRIEQSKMSI VVFSEDYANS WWCLEEVGKI
110 120 130 140 150
MQRRKEFNHG VLPIFYKVSK SDVSNQTGSF EAVFQSPTKI FNGDEQKIEE
160 170 180 190 200
LKVALKTASN IRGFVYPENS SEPDFLDEIV KNTFRMLNEL SPCVIPDDLP
210 220 230 240 250
GIESRSKELE KLLMFDNDEC VRVVGVLGMT GIGKTTVADI VYKQNFQRFD
260 270 280 290 300
GYEFLEDIED NSKRYGLPYL YQKLLHKLLD GENVDVRAQG RPENFLRNKK
310 320 330 340 350
LFIVLDNVTE EKQIEYLIGK KNVYRQGSRI VIITRDKKLL QKNADATYVV
360 370 380 390 400
PRLNDREAME LFCLQVFGNH YPTEEFVDLS NDFVCYAKGL PLALKLLGKG
410 420 430 440 450
LLTHDINYWK KKLEFLQVNP DKELQKELKS SYKALDDDQK SVFLDIACFF
460 470 480 490 500
RSEKADFVSS ILKSDDIDAK DVMRELEEKC LVTISYDRIE MHDLLHAMGK
510 520 530 540 550
EIGKEKSIRK AGERRRLWNH KDIRDILEHN TGTECVRGIF LNMSEVRRIK
560 570 580 590 600
LFPAAFTMLS KLKFLKFHSS HCSQWCDNDH IFQCSKVPDH FPDELVYLHW
610 620 630 640 650
QGYPYDCLPS DFDPKELVDL SLRYSHIKQL WEDEKNTESL RWVDLGQSKD
660 670 680 690 700
LLNLSGLSRA KNLERLDLEG CTSLDLLGSV KQMNELIYLN LRDCTSLESL
710 720 730 740 750
PKGFKIKSLK TLILSGCLKL KDFHIISESI ESLHLEGTAI ERVVEHIESL
760 770 780 790 800
HSLILLNLKN CEKLKYLPND LYKLKSLQEL VLSGCSALES LPPIKEKMEC
810 820 830 840 850
LEILLMDGTS IKQTPEMSCL SNLKICSFCR PVIDDSTGLY LDAHGCGSLE
860 870 880 890 900
NVSKPLTIPL VTERMHTTFI FTDCFKLNQA EKEDIVAQAQ LKSQLLARTS
910 920 930 940 950
RHHNHKGLLL DPLVAVCFPG HDIPSWFSHQ KMGSLIETDL LPHWCNIFKW
960 970 980 990 1000
SEETNEGNRC HPTSASFEFY LTDETERKLE CCEILRCGMN FLYARDENDR
1010 1020 1030 1040 1050
KFQGIRVTDT VERTSSEALV TIRGQSHSRI EERRYGRIRD EIMDMTGSSM
1060 1070 1080 1090 1100
IGGLRTFGFR KVAESEQECE YANDDFVRGK PELTLDIEIT RLKSFVTGQP
1110 1120 1130 1140 1150
FMFEGILPGL VSPETMIAYF MAIKEKLKTA LAKDISKPLY ELLVFLYFIF
1160
GLIIYFLVVV LLLD
Length:1,164
Mass (Da):133,919
Last modified:June 1, 1998 - v1
Checksum:iDAD200925589C283
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021768 Genomic DNA. Translation: CAA16928.1.
AL161551 Genomic DNA. Translation: CAB78953.1.
PIRiT06144.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021768 Genomic DNA. Translation: CAA16928.1.
AL161551 Genomic DNA. Translation: CAB78953.1.
PIRiT06144.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G19510.1.

Proteomic databases

ProMEXiO49469.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

TAIRiAT4G19510.

Phylogenomic databases

eggNOGiENOG410J8UW. Eukaryota.
ENOG4112BMQ. LUCA.
HOGENOMiHOG000064702.
PhylomeDBiO49469.

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR011713. Leu-rich_rpt_3.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07725. LRR_3. 1 hit.
PF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52058. SSF52058. 1 hit.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO49469_ARATH
AccessioniPrimary (citable) accession number: O49469
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: September 7, 2016
This is version 123 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.