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O49468 (O49468_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:F24J7.60 EMBL CAA16927.2
Ordered Locus Names:At4g19500 EMBL CAB78952.1
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length1239 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
O49468 [UniParc].

Last modified May 1, 1999. Version 2.
Checksum: 1E737772A4D790C4

FASTA1,239140,969
        10         20         30         40         50         60 
MAASFCGSRR YDVFPSFSKV DVRRSFLAHL LKELDRRLIN TFTDHGMERN LPIDAELLSA 

        70         80         90        100        110        120 
IAESRISIVI FSKNYASSTW CLDELVEIHT CYKELAQIVV PVFFNVHPSQ VKKQTGEFGK 

       130        140        150        160        170        180 
VFGKTCKGKP ENRKLRWMQA LAAVANIAGY DLQNWPDEAV MIEMVADDVS KKLFKSSNDF 

       190        200        210        220        230        240 
SDIVGIEAHL EAMSSILRLK SEKARMVGIS GPSGIGKTTI AKALFSKLSP QFHLRAFVTY 

       250        260        270        280        290        300 
KRTNQDDYDM KLCWIEKFLS EILGQKDLKV LDLGAVEQSL MHKKVLIILD DVDDLELLKT 

       310        320        330        340        350        360 
LVGQTGWFGF GSRIVVITQD RQLLKAHDIN LIYEGLGLAM KGKHREEWIE MLPRLRNDLD 

       370        380        390        400        410        420 
GKFKKTLRNY LPVIRKRVSN EEGGREKLKK GNKKLDLDEE FPGGEIYSDE IPSPTSNWKD 

       430        440        450        460        470        480 
TDDFDSGDII PIIADKSTTI IPNRRHSNDD WCSFCEFLRN RIPPLNPFKC SANDVIDFLR 

       490        500        510        520        530        540 
TRQVLGSTEA LVDRLIFSSE AFGIKPEENP FRSQAVTSYL KAARDMTREK ECILVFSCHD 

       550        560        570        580        590        600 
NLDVDETSFI EAISKELHKQ GFIPLTYNLL GRENLDEEML YGSRVGIMIL SSSYVSSRQS 

       610        620        630        640        650        660 
LDHLVAVMEH WKTTDLVIIP IYFKVRLSDI CGLKGRFEAA FLQLHMSLQE DRVQKWKAAM 

       670        680        690        700        710        720 
SEIVSIGGHE WTKGSQFILA EEVVRNASLR LYLKSSKNLL GILALLNHSQ STDVEIMGIW 

       730        740        750        760        770        780 
GIAGIDFHLM CQMKRPRQLR EDFISKLFGE EKGLGASDVK PSFMRDWFHK KTILLVLDDV 

       790        800        810        820        830        840 
SNARDAEAVI GGFGWFSHGH RIILTSRSKQ VLVQCKVKKP YEIQKLSDFE SFRLCKQYLD 

       850        860        870        880        890        900 
GENPVISELI SCSSGIPLAL KLLVSSVSKQ YITNMKDHLQ SLRKDPPTQI QEAFRRSFDG 

       910        920        930        940        950        960 
LDENEKNIFL DLACFFRGQS KDYAVLLLDA CGFFTYMGIC ELIDESLISL VDNKIEMPIP 

       970        980        990       1000       1010       1020 
FQDMGRIIVH EEDEDPCERS RLWDSKDIVD VLTNNSGTEA IEGIFLDASD LTCELSPTVF 

      1030       1040       1050       1060       1070       1080 
GKMYNLRLLK FYCSTSGNQC KLTLPHGLDT LPDELSLLHW ENYPLVYLPQ KFNPVNLVEL 

      1090       1100       1110       1120       1130       1140 
NMPYSNMEKL WEGKKNLEKL KNIKLSHSRE LTDILMLSEA LNLEHIDLEG CTSLIDVSMS 

      1150       1160       1170       1180       1190       1200 
IPCCGKLVSL NMKDCSRLRS LPSMVDLTTL KLLNLSGCSE FEDIQDFAPN LEEIYLAGTS 

      1210       1220       1230 
IRELPLSIRN LTELVTLDLE NCERLQEMPS LPVEIIRRT 

« Hide

References

« Hide 'large scale' references
[1]Bevan M., Vitale D., Liguori R., Argiriou A., De Simone V., Bancroft I., Mewes H.W., Mayer K.F.X., Lemcke K., Schueller C.
Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
EU, CSHL and WU Arabidopsis Sequencing Project
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]EU Arabidopsis sequencing project
Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Vitale D., Liguori R., Argiriou A., De Simone V., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL021768 Genomic DNA. Translation: CAA16927.2.
AL161551 Genomic DNA. Translation: CAB78952.1.
PIRT06143.

3D structure databases

ProteinModelPortalO49468.
SMRO49468. Positions 10-173, 176-323, 1014-1230.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGKOG0619.

Gene expression databases

GenevestigatorO49468.

Family and domain databases

Gene3D3.40.50.10140. 1 hit.
3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR000767. Disease_R.
IPR006936. DUF640.
IPR011713. Leu-rich_rpt_3.
IPR025875. Leu-rich_rpt_4.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
[Graphical view]
PfamPF04852. DUF640. 2 hits.
PF07725. LRR_3. 1 hit.
PF12799. LRR_4. 1 hit.
PF00931. NB-ARC. 2 hits.
PF01582. TIR. 2 hits.
[Graphical view]
PRINTSPR00364. DISEASERSIST.
SMARTSM00382. AAA. 1 hit.
SM00255. TIR. 2 hits.
[Graphical view]
SUPFAMSSF52200. SSF52200. 2 hits.
SSF52540. SSF52540. 2 hits.
PROSITEPS50104. TIR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO49468_ARATH
AccessionPrimary (citable) accession number: O49468
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: May 1, 1999
Last modified: June 11, 2014
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)