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Protein
Submitted name:

SOF1 protein-like protein

Gene

F20O9.130

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
SOF1 protein-like proteinImported
Gene namesi
Name:F20O9.130Imported
Ordered Locus Names:At4g28450Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini116 – 20085WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotationSAAS annotation, WD repeatSAAS annotation

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR011047. Quinoprotein_ADH-like_supfam.
IPR007287. Sof1.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF04158. Sof1. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 2 hits.
PROSITEiPS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O49454-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKAVEYQRA LTAAKLEKIF ARPFVGAMDG HRDGVSCMAK NPNYLKGIFS
60 70 80 90 100
ASMDGGLLII SLKVTFLLRP ELNLIYGIII GTQAPAKRNL WSQPVQSFQW
110 120 130 140 150
GTDSVISVRF NPGEPNLLAT SARMDIDFSP TGREFVTGSY DRSVRIFPYN
160 170 180 190 200
GGHSREIYHT KRMQRVFCVK YSCDATYVIS GSDDTNLRLW KAKASEQLGV
210 220 230 240 250
ILPREQKKHE YNEAVKNRYK HLSEVKRIVR HRHLPKPIYK AMGIIRTVND
260 270 280
SKRRKEARRK AHSAPGTVVT APLRKRKIIK EVE
Length:283
Mass (Da):32,232
Last modified:June 1, 1998 - v1
Checksum:i97F6D88EF2FC1DCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021749 Genomic DNA. Translation: CAA16884.1.
AL161572 Genomic DNA. Translation: CAB79647.1.
PIRiT04615.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021749 Genomic DNA. Translation: CAA16884.1.
AL161572 Genomic DNA. Translation: CAB79647.1.
PIRiT04615.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR011047. Quinoprotein_ADH-like_supfam.
IPR007287. Sof1.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF04158. Sof1. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 2 hits.
PROSITEiPS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Bevan M., Rose M., Hempel S., Entian K.-D., Hoheisel J., Mewes H.W., Mayer K.F.X., Lemcke K., Schueller C.
    Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. EU Arabidopsis sequencing project
    Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Rose M., Hempel S., Entian K.-D., Mewes H.W., Lemcke K., Mayer K.F.X.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. EU Arabidopsis sequencing project
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO49454_ARATH
AccessioniPrimary (citable) accession number: O49454
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: July 6, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.