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O49296

- GUN4_ARATH

UniProt

O49296 - GUN4_ARATH

Protein

Endoglucanase 4

Gene

At1g23210

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 101 (01 Oct 2014)
      Sequence version 1 (01 Jun 1998)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei409 – 4091By similarity
    Active sitei460 – 4601By similarity
    Active sitei469 – 4691By similarity

    GO - Molecular functioni

    1. cellulase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellulose catabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

    Enzyme and pathway databases

    BioCyciARA:AT1G23210-MONOMER.

    Protein family/group databases

    CAZyiGH9. Glycoside Hydrolase Family 9.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Endoglucanase 4 (EC:3.2.1.4)
    Alternative name(s):
    Endo-1,4-beta glucanase 4
    Gene namesi
    Ordered Locus Names:At1g23210
    ORF Names:F26F24.6, T26J12.2
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G23210.

    Subcellular locationi

    Secreted By similarity

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 489464Endoglucanase 4PRO_0000249257Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi453 – 4531N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PRIDEiO49296.

    Expressioni

    Gene expression databases

    GenevestigatoriO49296.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G23210.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliO49296.
    SMRiO49296. Positions 28-489.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG299923.
    HOGENOMiHOG000021033.
    InParanoidiO49296.
    OMAiRSFRENA.
    PhylomeDBiO49296.

    Family and domain databases

    Gene3Di1.50.10.10. 1 hit.
    InterProiIPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view]
    PfamiPF00759. Glyco_hydro_9. 1 hit.
    [Graphical view]
    SUPFAMiSSF48208. SSF48208. 1 hit.
    PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O49296-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAGKSFMTPA IMLAMLLLIS PETYAGHDYR DALRKSILFF EGQRSGKLPP    50
    DQRLKWRRDS ALRDGSSAGV DLTGGYYDAG DNVKFGFPMA FTTTMMSWSV 100
    IDFGKTMGPE LENAVKAIKW GTDYLMKATQ IPDVVFVQVG DAYSDHNCWE 150
    RPEDMDTLRT VYKIDKDHSG SEVAGETAAA LAAASIVFEK RDPVYSKMLL 200
    DRATRVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL WGAAWLHKAS 250
    KKRVYREFIV KNQVILRAGD TIHEFGWDNK HAGINVLVSK MVLMGKAEYF 300
    QSFKQNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL 350
    TYSNYLSHAN KVVPCGEFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY 400
    GSRFPQKIHH RGSSVPSVVD HPDRIGCKDG SRYFFSNNPN PNLLIGAVVG 450
    GPNITDDFPD SRPYFQLTEP TTYINAPLLG LLGYFSAHY 489
    Length:489
    Mass (Da):54,630
    Last modified:June 1, 1998 - v1
    Checksum:i9B46F1C3111C4D0B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002311 Genomic DNA. Translation: AAC00616.1.
    AC005292 Genomic DNA. Translation: AAF86995.1.
    CP002684 Genomic DNA. Translation: AEE30357.1.
    DQ056459 mRNA. Translation: AAY78616.1.
    BT026379 mRNA. Translation: ABH04486.1.
    PIRiE86366.
    RefSeqiNP_173735.1. NM_102170.1.
    UniGeneiAt.51731.

    Genome annotation databases

    EnsemblPlantsiAT1G23210.1; AT1G23210.1; AT1G23210.
    GeneIDi838930.
    KEGGiath:AT1G23210.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002311 Genomic DNA. Translation: AAC00616.1 .
    AC005292 Genomic DNA. Translation: AAF86995.1 .
    CP002684 Genomic DNA. Translation: AEE30357.1 .
    DQ056459 mRNA. Translation: AAY78616.1 .
    BT026379 mRNA. Translation: ABH04486.1 .
    PIRi E86366.
    RefSeqi NP_173735.1. NM_102170.1.
    UniGenei At.51731.

    3D structure databases

    ProteinModelPortali O49296.
    SMRi O49296. Positions 28-489.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G23210.1-P.

    Protein family/group databases

    CAZyi GH9. Glycoside Hydrolase Family 9.

    Proteomic databases

    PRIDEi O49296.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G23210.1 ; AT1G23210.1 ; AT1G23210 .
    GeneIDi 838930.
    KEGGi ath:AT1G23210.

    Organism-specific databases

    TAIRi AT1G23210.

    Phylogenomic databases

    eggNOGi NOG299923.
    HOGENOMi HOG000021033.
    InParanoidi O49296.
    OMAi RSFRENA.
    PhylomeDBi O49296.

    Enzyme and pathway databases

    BioCyci ARA:AT1G23210-MONOMER.

    Gene expression databases

    Genevestigatori O49296.

    Family and domain databases

    Gene3Di 1.50.10.10. 1 hit.
    InterProi IPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view ]
    Pfami PF00759. Glyco_hydro_9. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48208. SSF48208. 1 hit.
    PROSITEi PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W., Redman J.C., Wu H.C., Utterback T., Town C.D.
      Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "Arabidopsis ORF clones."
      Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.
      Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. "Phylogenetic analysis of the plant endo-beta-1,4-glucanase gene family."
      Libertini E., Li Y., McQueen-Mason S.J.
      J. Mol. Evol. 58:506-515(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY.

    Entry informationi

    Entry nameiGUN4_ARATH
    AccessioniPrimary (citable) accession number: O49296
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 19, 2006
    Last sequence update: June 1, 1998
    Last modified: October 1, 2014
    This is version 101 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3