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Protein

Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial

Gene

PCMP-E5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial
Gene namesi
Name:PCMP-E5
Ordered Locus Names:At1g77010
ORF Names:F22K20.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi

Organism-specific databases

AraportiAT1G77010
TAIRilocus:2025242 AT1G77010

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 64MitochondrionSequence analysisAdd BLAST64
ChainiPRO_000034286865 – 695Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrialAdd BLAST631

Proteomic databases

PaxDbiO49287
PRIDEiO49287

PTM databases

iPTMnetiO49287

Expressioni

Gene expression databases

ExpressionAtlasiO49287 baseline and differential
GenevisibleiO49287 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G77010.1

Structurei

3D structure databases

ProteinModelPortaliO49287
SMRiO49287
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati61 – 91PPR 1Add BLAST31
Repeati92 – 122PPR 2Add BLAST31
Repeati123 – 157PPR 3Add BLAST35
Repeati159 – 184PPR 4Add BLAST26
Repeati186 – 220PPR 5Add BLAST35
Repeati221 – 251PPR 6Add BLAST31
Repeati252 – 282PPR 7Add BLAST31
Repeati283 – 313PPR 8Add BLAST31
Repeati317 – 351PPR 9Add BLAST35
Repeati352 – 382PPR 10Add BLAST31
Repeati383 – 417PPR 11Add BLAST35
Repeati418 – 448PPR 12Add BLAST31
Repeati449 – 483PPR 13Add BLAST35
Repeati484 – 514PPR 14Add BLAST31
Repeati515 – 549PPR 15Add BLAST35
Repeati550 – 585PPR 16Add BLAST36
Repeati586 – 616PPR 17Add BLAST31

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni621 – 695Type E motif; degenerateAdd BLAST75

Sequence similaritiesi

Belongs to the PPR family. PCMP-E subfamily.Curated

Keywords - Domaini

Repeat, Transit peptide

Phylogenomic databases

eggNOGiKOG4197 Eukaryota
ENOG410Z7Z7 LUCA
HOGENOMiHOG000083580
InParanoidiO49287
OMAiCKAQGNE
OrthoDBiEOG093603SX
PhylomeDBiO49287

Family and domain databases

Gene3Di1.25.40.10, 4 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 11 hits
PF12854 PPR_1, 1 hit
PF13041 PPR_2, 1 hit
TIGRFAMsiTIGR00756 PPR, 6 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 19 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O49287-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILKYNSSYR FYLSSSFLQA MEVDCRRYYV RLLQSCSSRN RETLWRQTNG
60 70 80 90 100
LLLKKGFLSS IVIVANHLLQ MYSRSGKMGI ARNLFDEMPD RNYFSWNTMI
110 120 130 140 150
EGYMNSGEKG TSLRFFDMMP ERDGYSWNVV VSGFAKAGEL SVARRLFNAM
160 170 180 190 200
PEKDVVTLNS LLHGYILNGY AEEALRLFKE LNFSADAITL TTVLKACAEL
210 220 230 240 250
EALKCGKQIH AQILIGGVEC DSKMNSSLVN VYAKCGDLRM ASYMLEQIRE
260 270 280 290 300
PDDHSLSALI SGYANCGRVN ESRGLFDRKS NRCVILWNSM ISGYIANNMK
310 320 330 340 350
MEALVLFNEM RNETREDSRT LAAVINACIG LGFLETGKQM HCHACKFGLI
360 370 380 390 400
DDIVVASTLL DMYSKCGSPM EACKLFSEVE SYDTILLNSM IKVYFSCGRI
410 420 430 440 450
DDAKRVFERI ENKSLISWNS MTNGFSQNGC TVETLEYFHQ MHKLDLPTDE
460 470 480 490 500
VSLSSVISAC ASISSLELGE QVFARATIVG LDSDQVVSSS LIDLYCKCGF
510 520 530 540 550
VEHGRRVFDT MVKSDEVPWN SMISGYATNG QGFEAIDLFK KMSVAGIRPT
560 570 580 590 600
QITFMVVLTA CNYCGLVEEG RKLFESMKVD HGFVPDKEHF SCMVDLLARA
610 620 630 640 650
GYVEEAINLV EEMPFDVDGS MWSSILRGCV ANGYKAMGKK AAEKIIELEP
660 670 680 690
ENSVAYVQLS AIFATSGDWE SSALVRKLMR ENNVTKNPGS SWTDC
Length:695
Mass (Da):77,874
Last modified:June 1, 1998 - v1
Checksum:i627BD46DBED4969F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002291 Genomic DNA Translation: AAC00623.1
CP002684 Genomic DNA Translation: AEE35925.1
PIRiB96799
RefSeqiNP_177827.1, NM_106352.2

Genome annotation databases

EnsemblPlantsiAT1G77010.1; AT1G77010.1; AT1G77010
GeneIDi844037
GrameneiAT1G77010.1; AT1G77010.1; AT1G77010
KEGGiath:AT1G77010

Similar proteinsi

Entry informationi

Entry nameiPP127_ARATH
AccessioniPrimary (citable) accession number: O49287
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: June 1, 1998
Last modified: April 25, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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