Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Lipoxygenase

Gene
N/A
Organism
Solanum tuberosum (Potato)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.UniRule annotation

Cofactori

Fe cationUniRule annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DioxygenaseUniRule annotationSAAS annotation, Oxidoreductase

Keywords - Biological processi

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesisUniRule annotation

Keywords - Ligandi

IronUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00382.

Names & Taxonomyi

Protein namesi
Recommended name:
LipoxygenaseUniRule annotation (EC:1.13.11.-UniRule annotation)
OrganismiSolanum tuberosum (Potato)Imported
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum

Pathology & Biotechi

Chemistry

ChEMBLiCHEMBL3317.

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400054145.

Chemistry

BindingDBiO49150.

Structurei

3D structure databases

ProteinModelPortaliO49150.
SMRiO49150. Positions 21-864.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 163142PLATInterPro annotationAdd
BLAST
Domaini166 – 864699LipoxygenaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the lipoxygenase family.UniRule annotation
Contains PLAT domain.SAAS annotation
Contains lipoxygenase domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG410IH0D. Eukaryota.
ENOG410YN4N. LUCA.
KOiK15718.

Family and domain databases

Gene3Di2.60.60.20. 1 hit.
4.10.372.10. 1 hit.
InterProiIPR000907. LipOase.
IPR013819. LipOase_C.
IPR020834. LipOase_CS.
IPR020833. LipOase_Fe_BS.
IPR001246. LipOase_plant.
IPR027433. Lipoxygenase_domain_3.
IPR001024. PLAT/LH2_dom.
[Graphical view]
PANTHERiPTHR11771. PTHR11771. 2 hits.
PfamiPF00305. Lipoxygenase. 1 hit.
PF01477. PLAT. 1 hit.
[Graphical view]
PRINTSiPR00087. LIPOXYGENASE.
PR00468. PLTLPOXGNASE.
SMARTiSM00308. LH2. 1 hit.
[Graphical view]
SUPFAMiSSF48484. SSF48484. 1 hit.
SSF49723. SSF49723. 1 hit.
PROSITEiPS00711. LIPOXYGENASE_1. 1 hit.
PS00081. LIPOXYGENASE_2. 1 hit.
PS51393. LIPOXYGENASE_3. 1 hit.
PS50095. PLAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O49150-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIGQIMGGR ELFGGHDDSK KVKGTVVMMK KNALDFTDLA GSLTDIAFDV
60 70 80 90 100
LGQKVSFQLI SSVQGDPTNG LQGKHSNPAY LENSLFTLTP LTAGSETAFG
110 120 130 140 150
VTFDWNEEFG VPGAFIIKNT HINEFFLKSL TLEDVPNHGK VHFDCNSWVY
160 170 180 190 200
PSFRYKSDRI FFANQPYLPS KTPELLRKYR ENELLTLRGD GTGKREAWDR
210 220 230 240 250
IYDYDIYNDL GNPDQGKENV RTTLGGSAEY PYPRRGRTGR PPTRTDPKSE
260 270 280 290 300
SRIPLLLSLD IYVPRDERFG HLKMSDFLTY ALKSIVQFIL PELHALFDGT
310 320 330 340 350
PNEFDSFEDV LRLYEGGIKL PQGPLFKALT AAIPLEMIKE LLRTDGEGIL
360 370 380 390 400
RFPTPLVIKD SKTAWRTDEE FAREMLAGVN PIIISRLQEF PPKSKLDPEA
410 420 430 440 450
YGNQNSTITA EHIEDKLDGL TVDEAMNNNK LFILNHHDLL IPYLRRINTT
460 470 480 490 500
ITKSYASRTL LFLQDNGSLK PLAIELSLPH PDGDQFGVTS KVYTPSDQGV
510 520 530 540 550
ESSIWQLAKA YVAVNDAGVH QLISHWLNTH AVIEPFVIAT NRQLSVLHPI
560 570 580 590 600
HKLLYPHFRD TMNINASARQ ILINAGGVLE STVFQSKFAL EMSAVVYKDW
610 620 630 640 650
VFPDQALPAD LVKRGVAVED SSSPHGVRLL IEDYPYAVDG LEIWSAIKSW
660 670 680 690 700
VTDYCSFYYG SDEEILKDNE LQAWWKELRE VGHGDKKNEP WWPEMETPQE
710 720 730 740 750
LIDSCTTIIW IASALHAAVN FGQYPYAGYL PNRPTVSRRF MPEPGTPEYE
760 770 780 790 800
ELKKNPDKAF LKTITAQLQT LLGVSLVEIL SRHTTDEIYL GQRESPEWTK
810 820 830 840 850
DKEPLAAFDK FGKKLTDIEK QIIQRNGDNI LTNRSGPVNA PYTLLFPTSE
860
GGLTGKGIPN SVSI
Length:864
Mass (Da):97,308
Last modified:June 1, 1998 - v1
Checksum:i760A0D21C29127F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039651 mRNA. Translation: AAD04258.1.
RefSeqiNP_001275351.1. NM_001288422.1.
UniGeneiStu.965.

Genome annotation databases

GeneIDi102577615.
KEGGisot:102577615.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039651 mRNA. Translation: AAD04258.1.
RefSeqiNP_001275351.1. NM_001288422.1.
UniGeneiStu.965.

3D structure databases

ProteinModelPortaliO49150.
SMRiO49150. Positions 21-864.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400054145.

Chemistry

BindingDBiO49150.
ChEMBLiCHEMBL3317.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102577615.
KEGGisot:102577615.

Phylogenomic databases

eggNOGiENOG410IH0D. Eukaryota.
ENOG410YN4N. LUCA.
KOiK15718.

Enzyme and pathway databases

UniPathwayiUPA00382.

Family and domain databases

Gene3Di2.60.60.20. 1 hit.
4.10.372.10. 1 hit.
InterProiIPR000907. LipOase.
IPR013819. LipOase_C.
IPR020834. LipOase_CS.
IPR020833. LipOase_Fe_BS.
IPR001246. LipOase_plant.
IPR027433. Lipoxygenase_domain_3.
IPR001024. PLAT/LH2_dom.
[Graphical view]
PANTHERiPTHR11771. PTHR11771. 2 hits.
PfamiPF00305. Lipoxygenase. 1 hit.
PF01477. PLAT. 1 hit.
[Graphical view]
PRINTSiPR00087. LIPOXYGENASE.
PR00468. PLTLPOXGNASE.
SMARTiSM00308. LH2. 1 hit.
[Graphical view]
SUPFAMiSSF48484. SSF48484. 1 hit.
SSF49723. SSF49723. 1 hit.
PROSITEiPS00711. LIPOXYGENASE_1. 1 hit.
PS00081. LIPOXYGENASE_2. 1 hit.
PS51393. LIPOXYGENASE_3. 1 hit.
PS50095. PLAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Expression, purification, and characterization of a recombinant 5-lipoxygenase from potato tuber."
    Chen X., Reddanna P., Reddy G.R., Kidd R., Hildenbrandt G., Reddy C.C.
    Biochem. Biophys. Res. Commun. 243:438-443(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TuberImported.

Entry informationi

Entry nameiO49150_SOLTU
AccessioniPrimary (citable) accession number: O49150
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.