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Protein
Submitted name:

At1g24240/F3I6_17

Gene

F3I6.17

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
At1g24240/F3I6_17Imported
Submitted name:
F3I6.17 proteinImported
Submitted name:
Putative uncharacterized protein F3I6.17Imported
Submitted name:
Ribosomal protein L19 family proteinImported
Gene namesi
Name:F3I6.17Imported
Ordered Locus Names:At1g24240Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G24240.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G24240.1.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1698. Eukaryota.
COG0335. LUCA.
HOGENOMiHOG000016266.
OMAiPEFQASI.
OrthoDBiEOG09360NTN.

Family and domain databases

InterProiIPR001857. Ribosomal_L19.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR15680. PTHR15680. 1 hit.
PfamiPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PRINTSiPR00061. RIBOSOMALL19.
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01024. rplS_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

O48691-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLIRGSTRL LQRHRFSISN TLPFTSSSCG SWSANESRKL GFDSFPSTRA
60 70 80 90 100
ATYLISSLKN AGFSSLAVVP KQNFSSRCFS TTGDSVQGSP ESDCVVPQRI
110 120 130 140 150
KFKRLDKTAK HIMQIVDKEA VEEVRTLREI PEIKPGYIVQ LKVEVPENKR
160 170 180 190 200
RVSIVKGVVI ARRNAGLNST FRIRRLVAGV GVESMFPLYS PNLRVIKVVD
210 220
KKKVRRAKLY YLREKVNALK KH
Length:222
Mass (Da):25,068
Last modified:June 1, 1998 - v1
Checksum:iC86E493141F6AE75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002396 Genomic DNA. Translation: AAC00584.1.
AY044318 mRNA. Translation: AAK73259.1.
AY049255 mRNA. Translation: AAK83597.1.
AY090278 mRNA. Translation: AAL90939.1.
CP002684 Genomic DNA. Translation: AEE30499.1.
PIRiT00654.
RefSeqiNP_564213.1. NM_102270.5.
UniGeneiAt.33552.
At.62626.

Genome annotation databases

EnsemblPlantsiAT1G24240.1; AT1G24240.1; AT1G24240.
GeneIDi839038.
GrameneiAT1G24240.1; AT1G24240.1; AT1G24240.
KEGGiath:AT1G24240.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002396 Genomic DNA. Translation: AAC00584.1.
AY044318 mRNA. Translation: AAK73259.1.
AY049255 mRNA. Translation: AAK83597.1.
AY090278 mRNA. Translation: AAL90939.1.
CP002684 Genomic DNA. Translation: AEE30499.1.
PIRiT00654.
RefSeqiNP_564213.1. NM_102270.5.
UniGeneiAt.33552.
At.62626.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G24240.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G24240.1; AT1G24240.1; AT1G24240.
GeneIDi839038.
GrameneiAT1G24240.1; AT1G24240.1; AT1G24240.
KEGGiath:AT1G24240.

Organism-specific databases

TAIRiAT1G24240.

Phylogenomic databases

eggNOGiKOG1698. Eukaryota.
COG0335. LUCA.
HOGENOMiHOG000016266.
OMAiPEFQASI.
OrthoDBiEOG09360NTN.

Family and domain databases

InterProiIPR001857. Ribosomal_L19.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR15680. PTHR15680. 1 hit.
PfamiPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PRINTSiPR00061. RIBOSOMALL19.
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01024. rplS_bact. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO48691_ARATH
AccessioniPrimary (citable) accession number: O48691
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: November 30, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.