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Protein
Submitted name:

CLB1

Gene

543501

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processLipid transportSAAS annotation, Transport
LigandLipid-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
CLB1Imported
Gene namesi
Name:543501Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi
  • UP000004994 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 24HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi4081.Solyc01g094030.2.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 249SMP-LTDInterPro annotationAdd BLAST184
Domaini249 – 346C2InterPro annotationAdd BLAST98

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili390 – 410Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1012 Eukaryota
COG5038 LUCA
OMAiDFRWGGN
OrthoDBiEOG093608KP

Family and domain databases

Gene3Di2.60.40.150, 1 hit
InterProiView protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR031069 CLB_plant
IPR031468 SMP_LBD
PANTHERiPTHR10774:SF51 PTHR10774:SF51, 1 hit
PfamiView protein in Pfam
PF00168 C2, 1 hit
PF17047 SMP_LBD, 1 hit
SMARTiView protein in SMART
SM00239 C2, 1 hit
PROSITEiView protein in PROSITE
PS50004 C2, 1 hit
PS51847 SMP, 1 hit

Sequencei

Sequence statusi: Complete.

O48645-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLISGILMG MICGIGLMAV WKHMTRYRSN KRIAKAVDVK VMGCLCRDDL
60 70 80 90 100
KKVCGDNFPE WISFPVYEQV KWLNKQLSKL WPSIAEAGEA IIKESVEPLL
110 120 130 140 150
EDYRPPGITS LKFSKLSLGT VAPKIEGIRV QSLKKGQITM DIDLRWGGDP
160 170 180 190 200
NIVLGVEAAM VASIPIQLKN LQVFTVIRVI FQLTEEIPCI SAVVVALLSE
210 220 230 240 250
PKPRIDYVLK AVGGSLTALP GLSDMIDDTV NTIVTDMLEW PHRIVVPIAP
260 270 280 290 300
VDTSDLELKP QGKLTVTIVK ANGLKNHEMI GKSDPYAVVH IRPLFKVKTK
310 320 330 340 350
TIDNNLNPVW DQTFELIAED KETQSLFIEV FDKDNIGQDQ RMGVAKLPLN
360 370 380 390 400
ELVADAAKEI ELRLLPKLDM LKVKDKKDRG TITIKVLYHE FNKEEQLAAL
410 420 430 440 450
EAEKAILEER KKLKAEGVIG STMDAVGSGV GMVGSGIGAG VGLVGTGLGA
460 470 480 490 500
GVGIVGSGFG AVGSGLSKAG KFMGRTFTGS SKKNGSSTPV NSVQENGGAK

PLKSE
Length:505
Mass (Da):54,634
Last modified:June 1, 1998 - v1
Checksum:iCA615C6A55198670
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB001389 mRNA Translation: BAA24382.1
PIRiT04143
RefSeqiNP_001231830.1, NM_001244901.1
XP_010323781.1, XM_010325479.2
XP_010323784.1, XM_010325482.2
UniGeneiLes.95

Genome annotation databases

EnsemblPlantsiSolyc01g094030.2.1; Solyc01g094030.2.1; Solyc01g094030.2
GeneIDi543501
GrameneiSolyc01g094030.2.1; Solyc01g094030.2.1; Solyc01g094030.2
KEGGisly:543501

Similar proteinsi

Entry informationi

Entry nameiO48645_SOLLC
AccessioniPrimary (citable) accession number: O48645
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health