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Protein
Submitted name:

Limit dextrinase

Gene

HvLD99

Organism
Hordeum vulgare (Barley)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi317 – 3171Calcium 1Combined sources
Metal bindingi321 – 3211Calcium 1; via carbonyl oxygenCombined sources
Metal bindingi368 – 3681Calcium 2; via carbonyl oxygenCombined sources
Metal bindingi371 – 3711Calcium 2Combined sources
Metal bindingi373 – 3731Calcium 2; via carbonyl oxygenCombined sources
Metal bindingi413 – 4131Calcium 1; via carbonyl oxygenCombined sources
Metal bindingi720 – 7201Calcium 2Combined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDAi3.2.1.142. 2687.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Limit dextrinaseImported
Gene namesi
Name:HvLD99Imported
OrganismiHordeum vulgare (Barley)Imported
Taxonomic identifieri4513 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Interactioni

Protein-protein interaction databases

STRINGi4513.MLOC_9861.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Y5EX-ray2.49A22-904[»]
4AIOX-ray1.90A22-904[»]
4CVWX-ray2.67A/B22-904[»]
ProteinModelPortaliO48541.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini149 – 23385CBM_48InterPro annotationAdd
BLAST
Domaini732 – 902171DUF3372InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IN7N. Eukaryota.
COG1523. LUCA.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR011839. Pullul_strch.
IPR024561. Pullul_strch_C.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 5 hits.
PfamiPF02922. CBM_48. 1 hit.
PF11852. DUF3372. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR02103. pullul_strch. 1 hit.

Sequencei

Sequence statusi: Complete.

O48541-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVGETGASV SAAEAEAEAT QAFMPDARAY WVTSDLIAWN VGELEAQSVC
60 70 80 90 100
LYASRAAAMS LSPSNGGIQG YDSKVELQPE SAGLPETVTQ KFPFISSYRA
110 120 130 140 150
FKVPSSVDVA SLVKCQLVVA SFGADGKHVD VTGLQLPGVL DDMFAYTGPL
160 170 180 190 200
GAVFSEDSVS LHLWAPTAQG VSVCFFDGPA GPALETVQLK ESNGVWSVTG
210 220 230 240 250
PREWENRYYL YEVDVYHPTK AQVLKCLAGD PYARSLSANG ARTWLVDINN
260 270 280 290 300
ETLKPASWDE LADEKPKLDS FSDITIYELH IRDFSAHDGT VDSDSRGGFR
310 320 330 340 350
AFAYQASAGM EHLRKLSDAG LTHVHLLPSF HFAGVDDIKS NWKFVDECEL
360 370 380 390 400
ATFPPGSDMQ QAAVVAIQEE DPYNWGYNPV LWGVPKGSYA SDPDGPSRII
410 420 430 440 450
EYRQMVQALN RIGLRVVMDV VYNHLDSSGP CGISSVLDKI VPGYYVRRDT
460 470 480 490 500
NGQIENSAAM NNTASEHFMV DRLIVDDLLN WAVNYKVDGF RFDLMGHIMK
510 520 530 540 550
RTMVTKSALQ SLTTDAHGVD GSKIYLYGEG WDFAEVARNQ RGINGSQLNM
560 570 580 590 600
SGTGIGSFND RIRDAINGGN PFGNPLQQGF NTGLFLEPNG FYQGNEADTR
610 620 630 640 650
RSLATYADQI QIGLAGNLRD YVLISHTGEA KKGSEIHTFD GLPVGYTASP
660 670 680 690 700
IETINYVSAH DNETLFDVIS VKTPMILSVD ERCRINHLAS SMMALSQGIP
710 720 730 740 750
FFHAGDEILR SKSIDRDSYN SGDWFNKLDF TYETNNWGVG LPPSEKNEDN
760 770 780 790 800
WPLMKPRLEN PSFKPAKGHI LAALDSFVDI LKIRYSSPLF RLSTANDIKQ
810 820 830 840 850
RVRFHNTGPS LVPGVIVMGI EDARGESPEM AQLDTNFSYV VTVFNVCPHE
860 870 880 890 900
VSMDIPALAS MGFELHPVQV NSSDTLVRKS AYEAATGRFT VPGRTVSVFV

EPRC
Length:904
Mass (Da):99,124
Last modified:June 1, 1998 - v1
Checksum:iC7116CC2DE99ED03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022725 Genomic DNA. Translation: AAD04189.1.
PIRiT04377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022725 Genomic DNA. Translation: AAD04189.1.
PIRiT04377.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Y5EX-ray2.49A22-904[»]
4AIOX-ray1.90A22-904[»]
4CVWX-ray2.67A/B22-904[»]
ProteinModelPortaliO48541.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4513.MLOC_9861.1.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IN7N. Eukaryota.
COG1523. LUCA.

Enzyme and pathway databases

BRENDAi3.2.1.142. 2687.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR011839. Pullul_strch.
IPR024561. Pullul_strch_C.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 5 hits.
PfamiPF02922. CBM_48. 1 hit.
PF11852. DUF3372. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR02103. pullul_strch. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO48541_HORVU
AccessioniPrimary (citable) accession number: O48541
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: March 16, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.