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UniProtKB - O48541 (O48541_HORVU)

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Protein
Submitted name:

Limit dextrinase

Gene

HvLD99

Organism
Hordeum vulgare (Barley)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi317Calcium 1Combined sources1
Metal bindingi321Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi368Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi371Calcium 2Combined sources1
Metal bindingi373Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi413Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi720Calcium 2Combined sources1

GO - Molecular functioni

Complete GO annotation...

GO - Biological processi

Complete GO annotation...

Keywordsi

LigandCalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDAi3.2.1.142. 2687.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Limit dextrinaseImported
Gene namesi
Name:HvLD99Imported
OrganismiHordeum vulgare (Barley)Imported
Taxonomic identifieri4513 [NCBI]
Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BOP clade › Pooideae › Triticodae › Triticeae › Hordeinae › Hordeum

Interactioni

Protein-protein interaction databases

STRINGi4513.MLOC_9861.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2Y5EX-ray2.49A22-503[»]
A505-904[»]
4AIOX-ray1.90A22-503[»]
A505-904[»]
4CVWX-ray2.67A/B22-904[»]
ProteinModelPortaliO48541.
SMRiO48541.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 233CBM_48InterPro annotationAdd BLAST85
Domaini732 – 902DUF3372InterPro annotationAdd BLAST171

Phylogenomic databases

eggNOGiENOG410IN7N. Eukaryota.
COG1523. LUCA.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR004193. Glyco_hydro_13_N.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR011839. Pullul_strch.
IPR024561. Pullul_strch_C.
PfamiView protein in Pfam
PF02922. CBM_48. 1 hit.
PF11852. DUF3372. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR02103. pullul_strch. 1 hit.

Sequencei

Sequence statusi: Complete.

O48541-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVGETGASV SAAEAEAEAT QAFMPDARAY WVTSDLIAWN VGELEAQSVC 
        60         70         80         90        100
LYASRAAAMS LSPSNGGIQG YDSKVELQPE SAGLPETVTQ KFPFISSYRA 
       110        120        130        140        150
FKVPSSVDVA SLVKCQLVVA SFGADGKHVD VTGLQLPGVL DDMFAYTGPL 
       160        170        180        190        200
GAVFSEDSVS LHLWAPTAQG VSVCFFDGPA GPALETVQLK ESNGVWSVTG 
       210        220        230        240        250
PREWENRYYL YEVDVYHPTK AQVLKCLAGD PYARSLSANG ARTWLVDINN 
       260        270        280        290        300
ETLKPASWDE LADEKPKLDS FSDITIYELH IRDFSAHDGT VDSDSRGGFR 
       310        320        330        340        350
AFAYQASAGM EHLRKLSDAG LTHVHLLPSF HFAGVDDIKS NWKFVDECEL 
       360        370        380        390        400
ATFPPGSDMQ QAAVVAIQEE DPYNWGYNPV LWGVPKGSYA SDPDGPSRII 
       410        420        430        440        450
EYRQMVQALN RIGLRVVMDV VYNHLDSSGP CGISSVLDKI VPGYYVRRDT 
       460        470        480        490        500
NGQIENSAAM NNTASEHFMV DRLIVDDLLN WAVNYKVDGF RFDLMGHIMK 
       510        520        530        540        550
RTMVTKSALQ SLTTDAHGVD GSKIYLYGEG WDFAEVARNQ RGINGSQLNM 
       560        570        580        590        600
SGTGIGSFND RIRDAINGGN PFGNPLQQGF NTGLFLEPNG FYQGNEADTR 
       610        620        630        640        650
RSLATYADQI QIGLAGNLRD YVLISHTGEA KKGSEIHTFD GLPVGYTASP 
       660        670        680        690        700
IETINYVSAH DNETLFDVIS VKTPMILSVD ERCRINHLAS SMMALSQGIP 
       710        720        730        740        750
FFHAGDEILR SKSIDRDSYN SGDWFNKLDF TYETNNWGVG LPPSEKNEDN 
       760        770        780        790        800
WPLMKPRLEN PSFKPAKGHI LAALDSFVDI LKIRYSSPLF RLSTANDIKQ 
       810        820        830        840        850
RVRFHNTGPS LVPGVIVMGI EDARGESPEM AQLDTNFSYV VTVFNVCPHE 
       860        870        880        890        900
VSMDIPALAS MGFELHPVQV NSSDTLVRKS AYEAATGRFT VPGRTVSVFV 

EPRC
Length:904
Mass (Da):99,124
Last modified:June 1, 1998 - v1
Checksum:iC7116CC2DE99ED03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022725 Genomic DNA. Translation: AAD04189.1.
PIRiT04377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022725 Genomic DNA. Translation: AAD04189.1.
PIRiT04377.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2Y5EX-ray2.49A22-503[»]
A505-904[»]
4AIOX-ray1.90A22-503[»]
A505-904[»]
4CVWX-ray2.67A/B22-904[»]
ProteinModelPortaliO48541.
SMRiO48541.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4513.MLOC_9861.1.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IN7N. Eukaryota.
COG1523. LUCA.

Enzyme and pathway databases

BRENDAi3.2.1.142. 2687.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR004193. Glyco_hydro_13_N.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR011839. Pullul_strch.
IPR024561. Pullul_strch_C.
PfamiView protein in Pfam
PF02922. CBM_48. 1 hit.
PF11852. DUF3372. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR02103. pullul_strch. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO48541_HORVU
AccessioniPrimary (citable) accession number: O48541
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: June 7, 2017
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.