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Protein
Submitted name:

Cytochrome c oxidase subunit II

Gene

COX2

Organism
Onchocerca volvulus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Electron transportSAAS annotation, Transport

Keywords - Ligandi

CopperSAAS annotation, Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c oxidase subunit IIImported
Submitted name:
Cytochrome oxidase subunit 2Imported
Gene namesi
Name:COX2Imported
Encoded oniMitochondrionImported
OrganismiOnchocerca volvulusImported
Taxonomic identifieri6282 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaFilarioideaOnchocercidaeOnchocerca

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 4719HelicalSequence analysisAdd
BLAST
Transmembranei67 – 8620HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionImported

Structurei

3D structure databases

ProteinModelPortaliO47580.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini95 – 228134COX2_CUAInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR001505. Copper_CuA.
IPR008972. Cupredoxin.
IPR002429. Cyt_c_oxidase_su2_C.
[Graphical view]
PfamiPF00116. COX2. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS00078. COX2. 1 hit.
PS50857. COX2_CUA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O47580-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLQNYVFPI PGNSYVFCCY YIHNYYSHII FFGFFVMFLV SGGIYFFGNS
60 70 80 90 100
FKFNLKRSDS RMIELILQVL IVNFLIMMAG PGFWLIQYQG RMFRQSELTL
110 120 130 140 150
KVIGHQWYWS YEYGDSGKLC FDSFMKSLDD LSLGDFRLFD VDNRCVLPVG
160 170 180 190 200
VNVGVYCTSS DVIHSFAIPK CFIKMDALNG LLTKVTCSFS CSGLFFGQCS
210 220 230
EICGANHSFM PIVLELTSLE CWKGWSVNYL LG
Length:232
Mass (Da):26,689
Last modified:June 1, 1998 - v1
Checksum:i0651064D1509482D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015193 Genomic DNA. Translation: AAC61619.1.
KT599912 Genomic DNA. Translation: ALG63681.1.
PIRiT11072.
RefSeqiNP_008377.1. NC_001861.1.

Genome annotation databases

GeneIDi808138.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015193 Genomic DNA. Translation: AAC61619.1.
KT599912 Genomic DNA. Translation: ALG63681.1.
PIRiT11072.
RefSeqiNP_008377.1. NC_001861.1.

3D structure databases

ProteinModelPortaliO47580.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi808138.

Organism-specific databases

CTDi4513.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR001505. Copper_CuA.
IPR008972. Cupredoxin.
IPR002429. Cyt_c_oxidase_su2_C.
[Graphical view]
PfamiPF00116. COX2. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS00078. COX2. 1 hit.
PS50857. COX2_CUA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO47580_ONCVO
AccessioniPrimary (citable) accession number: O47580
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: February 17, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.