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Protein

30S ribosomal protein S2, chloroplastic

Gene

rps2-1

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S2, chloroplastic
Gene namesi
Name:rps2-1
Encoded oniPlastid; Chloroplast
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
Proteomesi
  • UP000006906 Componenti: Chloroplast

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001343161 – 57030S ribosomal protein S2, chloroplasticAdd BLAST570

Proteomic databases

PaxDbiO47027.
PRIDEiO47027.

Interactioni

Protein-protein interaction databases

STRINGi3055.DAA00936.

Structurei

3D structure databases

ProteinModelPortaliO47027.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 89TRAM 1Add BLAST62
Domaini104 – 169TRAM 2Add BLAST66

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni1 – 306N-terminal extensionAdd BLAST306

Sequence similaritiesi

Belongs to the ribosomal protein S2P family.Curated
Contains 2 TRAM domains.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0832. Eukaryota.
COG0052. LUCA.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_00291_B. Ribosomal_S2_B. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR023591. Ribosomal_S2_flav_dom.
IPR002792. TRAM_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
PF01938. TRAM. 1 hit.
[Graphical view]
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS50926. TRAM. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O47027-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNKKPPYLI LSLIMIKTQK SKQTAVRKLI PGNVISLKIT AMGANNVGIN
60 70 80 90 100
EFTFGIPVLV PNAKLGETVQ AKVLKILASK KIAIAKLIKV VTKTNATETN
110 120 130 140 150
NLAALTPGAT LDVTITKLGP NSTGIADLGN NYNNVNKLIV KKSAITIGEK
160 170 180 190 200
VTVLVTRVKN GYAFGVATVS TQRLNQVSTS LTQNSFKGTK FTVVLPKNAK
210 220 230 240 250
RYLKHLVFKV TTATAQNLSV NGFEQTLFKK GAVGLDTRIN NQNGSAGNLT
260 270 280 290 300
TVPTNTILFV KPNLGAKLGD KVQIQIIKFA SIENGTLTYN VAIAKIIKLN
310 320 330 340 350
PLSTPQKKAF VRSSLRQMLK SGMHYGEKAI KCNARMKNYV WTRKKGTDTK
360 370 380 390 400
VEARPLIKKG RNLINLLKTR RCLTKALAQL TKYAAKGKTF LFVGTKKAAS
410 420 430 440 450
GLVARAALFS KKAFFVNTRW LGGMLTNWKT ILKSISKIRP ILKEKQMIIK
460 470 480 490 500
DILEKRQTIK ARLIQKALLL RKKSKLMLKK GRLLIQMLKQ NNSNSTSGKQ
510 520 530 540 550
AVRFLFTEKT NLLNTKRKEF VSKGILLLEK RQQLVVKRQE LITQSQTLKS
560 570
KAIQLTNTIS QFIKQFNLFT
Length:570
Mass (Da):63,159
Last modified:June 1, 1998 - v1
Checksum:iF647A067EDB83B4F
GO

Sequence cautioni

The sequence ACJ50123 differs from that shown. Reason: Erroneous termination at position 571. Translated as stop.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y16473 Genomic DNA. Translation: CAA76245.1.
FJ423446 Genomic DNA. Translation: ACJ50123.1. Sequence problems.
BK000554 Genomic DNA. Translation: DAA00936.1.
PIRiT07993.
RefSeqiNP_958391.1. NC_005353.1.

Genome annotation databases

EnsemblPlantsiDAA00936; DAA00936; DAA00936.
GeneIDi2717006.
GrameneiDAA00936; DAA00936; DAA00936.
KEGGicre:ChreCp035.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y16473 Genomic DNA. Translation: CAA76245.1.
FJ423446 Genomic DNA. Translation: ACJ50123.1. Sequence problems.
BK000554 Genomic DNA. Translation: DAA00936.1.
PIRiT07993.
RefSeqiNP_958391.1. NC_005353.1.

3D structure databases

ProteinModelPortaliO47027.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3055.DAA00936.

Proteomic databases

PaxDbiO47027.
PRIDEiO47027.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiDAA00936; DAA00936; DAA00936.
GeneIDi2717006.
GrameneiDAA00936; DAA00936; DAA00936.
KEGGicre:ChreCp035.

Phylogenomic databases

eggNOGiKOG0832. Eukaryota.
COG0052. LUCA.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_00291_B. Ribosomal_S2_B. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR023591. Ribosomal_S2_flav_dom.
IPR002792. TRAM_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
PF01938. TRAM. 1 hit.
[Graphical view]
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS50926. TRAM. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRR2A_CHLRE
AccessioniPrimary (citable) accession number: O47027
Secondary accession number(s): B7U1H6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2003
Last sequence update: June 1, 1998
Last modified: October 5, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.