O46912 (RR13_GUITH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S13, chloroplastic

Gene names

Name:

rps13

Encoded on

Plastid; Chloroplast

Organism

Guillardia theta (Cryptomonas phi)

Taxonomic identifier

55529 [NCBI]

Taxonomic lineage

Eukaryota › Cryptophyta › Pyrenomonadales › Geminigeraceae › Guillardia

Protein attributes

Sequence length	122 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA By similarity. HAMAP MF_01315_B
Subunit structure	Part of the 30S ribosomal subunit.
Subcellular location	Plastid › chloroplast HAMAP MF_01315_B.
Sequence similarities	Belongs to the ribosomal protein S13P family.

Ontologies

Keywords
Cellular component	Chloroplast Plastid
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	chloroplast Inferred from electronic annotation. Source: UniProtKB-SubCell ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 122	122	30S ribosomal protein S13, chloroplastic HAMAP MF_01315_B		PRO_0000132199

Sequences

	Sequence		Length	Mass (Da)
	O46912 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 89F4B79FCBCBE0F8	FASTA	122	13,789
	10 20 30 40 50 60 MARISGIDLP KNKRIEIALT YIYGVGLSSS QKILEKANID ANKRCKDLDD NEVSLIRSII 70 80 90 100 110 120 DENYPVEGAA KRVESMNIKR LMEINCIRGK RHRVGLPLRG QRTRTNARTR RGAKKTVAGK KK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The large ribosomal protein gene cluster of a cryptomonad plastid: gene organization, sequence and evolutionary implications." Wang S.L., Liu X.-Q., Douglas S.E. Biochem. Mol. Biol. Int. 41:1035-1044(1997) [PubMed: 9137835] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae." Douglas S.E., Penny S.L. J. Mol. Evol. 48:236-244(1999) [PubMed: 9929392] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF041468 Genomic DNA. Translation: AAC35722.1.
RefSeq	NP_050788.1. NC_000926.1.
3D structure databases
ProteinModelPortal	O46912.
SMR	O46912. Positions 2-122.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	857096.
GenomeReviews	Gene locus rps13 in contig AF041468_GR.
Phylogenomic databases
HOGENOM	HBG737405.
OMA	YRGRRHR.
ProtClustDB	CHL00137.
Family and domain databases
HAMAP	MF_01315_B. Ribosomal_S13_B. [Tree]
InterPro	IPR001892. Ribosomal_S13. IPR010979. Ribosomal_S13-like_H2TH. IPR019980. Ribosomal_S13_bac-type. IPR018269. Ribosomal_S13_CS. [Graphical view]
PANTHER	PTHR10871. PTHR10871. 1 hit.
Pfam	PF00416. Ribosomal_S13. 1 hit. [Graphical view]
PIRSF	PIRSF002134. Ribosomal_S13. 1 hit.
SUPFAM	SSF46946. Ribosomal_H2TH. 1 hit.
TIGRFAMs	TIGR03631. Bact_S13. 1 hit.
PROSITE	PS00646. RIBOSOMAL_S13_1. 1 hit. PS50159. RIBOSOMAL_S13_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RR13_GUITH

Accession

Primary (citable) accession number: O46912

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	June 1, 1998
Last modified:	October 19, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)