O46908 (RK6_GUITH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L6, chloroplastic

Gene names

Name:

rpl6

Encoded on

Plastid; Chloroplast

Organism

Guillardia theta (Cryptomonas phi)

Taxonomic identifier

55529 [NCBI]

Taxonomic lineage

Eukaryota › Cryptophyta › Pyrenomonadales › Geminigeraceae › Guillardia

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds 23S rRNA By similarity. HAMAP MF_01365_B
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01365_B
Subcellular location	Plastid › chloroplast HAMAP MF_01365_B.
Sequence similarities	Belongs to the ribosomal protein L6P family.

Ontologies

Keywords
Cellular component	Chloroplast Plastid
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	chloroplast Inferred from electronic annotation. Source: UniProtKB-SubCell ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 179	179	50S ribosomal protein L6, chloroplastic HAMAP MF_01365_B		PRO_0000131078

Sequences

	Sequence		Length	Mass (Da)
	O46908 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 8B4C0BDB0152AD24	FASTA	179	19,527
	10 20 30 40 50 60 MSRIGKLPVK FSEKVTMKID QDNIIVKGPK GELALGLSKN INITIENNTL FVKPVTKEPQ 70 80 90 100 110 120 VLKLFGTYRA IINNMVVGVT KGFEKRLELQ GVGYRAQLQG KDLSLSVGYS HPVVIKAPTG 130 140 150 160 170 INIAVENNTI VIISGISKEL VGQIASNIRS IKPPEPYKGK GIRYVGEFVR KKAGKAGKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The large ribosomal protein gene cluster of a cryptomonad plastid: gene organization, sequence and evolutionary implications." Wang S.L., Liu X.-Q., Douglas S.E. Biochem. Mol. Biol. Int. 41:1035-1044(1997) [PubMed: 9137835] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae." Douglas S.E., Penny S.L. J. Mol. Evol. 48:236-244(1999) [PubMed: 9929392] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF041468 Genomic DNA. Translation: AAC35717.1.
RefSeq	NP_050783.1. NC_000926.1.
3D structure databases
ProteinModelPortal	O46908.
SMR	O46908. Positions 8-170.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	857091.
GenomeReviews	Gene locus rpl6 in contig AF041468_GR.
Phylogenomic databases
HOGENOM	HBG606796.
OMA	ALINNMV.
PhylomeDB	O46908.
ProtClustDB	CHL00140.
Family and domain databases
HAMAP	MF_01365_B. Ribosomal_L6_B. [Tree]
InterPro	IPR000702. Ribosomal_L6. IPR020040. Ribosomal_L6_a/b-dom. IPR019906. Ribosomal_L6_bac-type. IPR002358. Ribosomal_L6_CS. [Graphical view]
Gene3D	G3DSA:3.90.930.12. Ribosomal_L6. 2 hits.
PANTHER	PTHR11655:SF6. PTHR11655:SF6. 1 hit. PTHR11655. Ribosomal_L6. 1 hit.
Pfam	PF00347. Ribosomal_L6. 2 hits. [Graphical view]
PIRSF	PIRSF002162. Ribosomal_L6. 1 hit.
PRINTS	PR00059. RIBOSOMALL6.
SUPFAM	SSF56053. Ribosomal_L6. 2 hits.
TIGRFAMs	TIGR03654. L6_bact. 1 hit.
PROSITE	PS00525. RIBOSOMAL_L6_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RK6_GUITH

Accession

Primary (citable) accession number: O46908

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	June 1, 1998
Last modified:	September 21, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)