O46906 (RK5_GUITH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L5, chloroplastic

Gene names

Name:

rpl5

Encoded on

Plastid; Chloroplast

Organism

Guillardia theta (Cryptomonas phi)

Taxonomic identifier

55529 [NCBI]

Taxonomic lineage

Eukaryota › Cryptophyta › Pyrenomonadales › Geminigeraceae › Guillardia

Protein attributes

Sequence length	181 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds 5S rRNA, forms part of the central protuberance of the 50S subunit By similarity. HAMAP MF_01333_B
Subunit structure	Part of the 50S ribosomal subunit; contacts the 5S rRNA By similarity.
Subcellular location	Plastid › chloroplast HAMAP MF_01333_B.
Sequence similarities	Belongs to the ribosomal protein L5P family.

Ontologies

Keywords
Cellular component	Chloroplast Plastid
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	chloroplast Inferred from electronic annotation. Source: UniProtKB-SubCell ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 181	181	50S ribosomal protein L5, chloroplastic HAMAP MF_01333_B		PRO_0000125043

Sequences

	Sequence		Length	Mass (Da)
	O46906 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 6C45BACB10D3F637	FASTA	181	20,565
	10 20 30 40 50 60 MNKSLKEIYY QDVIPGLIEQ FNYTNIHQVL KITKITLNRG LGEASKNNKI LEASIKEFEL 70 80 90 100 110 120 ISGQHPLINK ARKSVAGFKI REGMPVGISV TLRKKLMYTF LEKLIHLSLP RIRDFRGVSV 130 140 150 160 170 180 KSFDGRGNYN LGIKEQLIFP EIEYDQVDQV RGLDISITTT AKTQQEGIAL LRALGMPFND N

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The large ribosomal protein gene cluster of a cryptomonad plastid: gene organization, sequence and evolutionary implications." Wang S.L., Liu X.-Q., Douglas S.E. Biochem. Mol. Biol. Int. 41:1035-1044(1997) [PubMed: 9137835] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae." Douglas S.E., Penny S.L. J. Mol. Evol. 48:236-244(1999) [PubMed: 9929392] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF041468 Genomic DNA. Translation: AAC35715.1.
RefSeq	NP_050781.1. NC_000926.1.
3D structure databases
ProteinModelPortal	O46906.
SMR	O46906. Positions 1-178.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	857089.
GenomeReviews	Gene locus rpl5 in contig AF041468_GR.
Phylogenomic databases
HOGENOM	HBG592167.
OMA	RQGMPIG.
PhylomeDB	O46906.
ProtClustDB	CHL00078.
Family and domain databases
HAMAP	MF_01333_B. Ribosomal_L5_B. [Tree]
InterPro	IPR002132. Ribosomal_L5. IPR020930. Ribosomal_L5_bac-type. IPR022803. Ribosomal_L5_domain. [Graphical view]
Gene3D	G3DSA:3.30.1440.10. Ribosomal_L5. 1 hit.
PANTHER	PTHR11994. Ribosomal_L5. 1 hit.
Pfam	PF00281. Ribosomal_L5. 1 hit. PF00673. Ribosomal_L5_C. 1 hit. [Graphical view]
PIRSF	PIRSF002161. Ribosomal_L5. 1 hit.
SUPFAM	SSF55282. Ribosomal_L5. 1 hit.
PROSITE	PS00358. RIBOSOMAL_L5. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RK5_GUITH

Accession

Primary (citable) accession number: O46906

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	June 1, 1998
Last modified:	September 21, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)