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O46173 (O46173_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:yps EMBL AAB94634.1
ORF Names:CG5654 FlyBase FBgn0022959
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length359 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 CSD (cold-shock) domain. RuleBase RU000407

Sequences

Sequence LengthMass (Da)Tools
O46173 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 64CA1D9E144AFF3D

FASTA35938,941
        10         20         30         40         50         60 
MADAAESKPL AAEQQQQAQQ QPEQQQNPPN PQEQDHEQEP LDELQGQQGQ PAPPTKEVIA 

        70         80         90        100        110        120 
TKVTGTVKWF NVKSGYGFIN RNDTREDVFV HQSAIANNPK KAVRSVGDGE VVEFDVVIGE 

       130        140        150        160        170        180 
KGNEAANVTG PSGEPVRGSQ FAADKRRNFR PWMKKNRRKD GEVEGEDAES SAQQQQQQAA 

       190        200        210        220        230        240 
PIVDGQPQQQ VQSGPRQPRQ NFRRGPPGGP PGGPRGGPRG PPGGAPGGPR RYNNYYLRQP 

       250        260        270        280        290        300 
RRGLGGGDGS AEPGVHDQNP EGLQRGEGQG PRRGGGPPAG PQRRFFRRNF NNGPPPPRRD 

       310        320        330        340        350 
GRIHSRPGTA TPTTATSTSA RGNQMALAVV RSSSQRRTAL KSCKIQPQRA LHRKGSERI 

« Hide

References

[1]"Identification and developmental characterization of a novel Y-box protein from Drosophila melanogaster."
Thieringer H.A., Singh K., Trivedi H., Inouye M.
Nucleic Acids Res. 25:4764-4770(1997) [PubMed: 9365254] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U49120 mRNA. Translation: AAB94634.1.

3D structure databases

HSSPHSSP built from PDB template 1G6P based on UniProtKB O54310.
ProteinModelPortalO46173.
SMRO46173. Positions 56-131.
ModBaseSearch...

Protein-protein interaction databases

IntActO46173. 1 interaction.
STRINGO46173.

Proteomic databases

PRIDEO46173.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

FlyBaseFBgn0022959. yps.

Phylogenomic databases

InParanoidO46173.
OrthoDBEOG4MPG6H.

Gene expression databases

ArrayExpressO46173.
BgeeO46173.

Family and domain databases

InterProIPR019844. Cold-shock_CS.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
PfamPF00313. CSD. 1 hit.
[Graphical view]
PRINTSPR00050. COLDSHOCK.
SMARTSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO46173_DROME
AccessionPrimary (citable) accession number: O46173
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: October 19, 2011
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)