Unreviewed, UniProtKB/TrEMBL O46173 (O46173_DROME)

Names and origin

Protein names

Submitted name:
    Y-box protein EMBL AAB94634.1

Gene names

Name:	yps EMBL AAB94634.1
ORF Names:	CG5654 FlyBase FBgn0022959

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome] EMBL AAB94634.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	359 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 CSD (cold-shock) domain. RuleBase RU000407V6

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	oogenesis Non-traceable author statement. Source: FlyBase regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro mRNA binding Traceable author statement. Source: FlyBase
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O46173-1 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 64CA1D9E144AFF3D	FASTA	359	38,941
	10 20 30 40 50 60 MADAAESKPL AAEQQQQAQQ QPEQQQNPPN PQEQDHEQEP LDELQGQQGQ PAPPTKEVIA 70 80 90 100 110 120 TKVTGTVKWF NVKSGYGFIN RNDTREDVFV HQSAIANNPK KAVRSVGDGE VVEFDVVIGE 130 140 150 160 170 180 KGNEAANVTG PSGEPVRGSQ FAADKRRNFR PWMKKNRRKD GEVEGEDAES SAQQQQQQAA 190 200 210 220 230 240 PIVDGQPQQQ VQSGPRQPRQ NFRRGPPGGP PGGPRGGPRG PPGGAPGGPR RYNNYYLRQP 250 260 270 280 290 300 RRGLGGGDGS AEPGVHDQNP EGLQRGEGQG PRRGGGPPAG PQRRFFRRNF NNGPPPPRRD 310 320 330 340 350 GRIHSRPGTA TPTTATSTSA RGNQMALAVV RSSSQRRTAL KSCKIQPQRA LHRKGSERI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Identification and developmental characterization of a novel Y-box protein from Drosophila melanogaster." Thieringer H.A., Singh K., Trivedi H., Inouye M. Nucleic Acids Res. 25:4764-4770(1997) [PubMed: 9365254] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Phosphoproteome analysis of Drosophila melanogaster embryos." Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P. J. Proteome Res. 7:1675-1682(2008) [PubMed: 18327897] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U49120 mRNA. Translation: AAB94634.1.
3D structure databases
HSSP	HSSP built from PDB template 1G6P based on UniProtKB O54310.
SMR	O46173. Positions 56-131.
ModBase	Search...
Proteomic databases
PRIDE	O46173.
Genome annotation databases
Ensembl	FBgn0022959. Drosophila melanogaster. [Contig view]
Organism-specific databases
FlyBase	FBgn0022959. yps.
Family and domain databases
InterPro	IPR019844. Cold-shock_conserved_site. IPR011129. Cold_shock_prot. IPR002059. CSP_DNA_bd. IPR012340. NA-bd_OB-fold. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
Pfam	PF00313. CSD. 1 hit. [Graphical view]
PRINTS	PR00050. COLDSHOCK.
ProDom	PD000621. Cold_shock. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00357. CSP. 1 hit. [Graphical view]
PROSITE	PS00352. COLD_SHOCK. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O46173_DROME

Accession

Primary (citable) accession number: O46173

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	June 16, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)