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Protein
Submitted name:

Y-box protein

Gene

yps

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • DNA binding Source: InterPro
  • mRNA binding Source: FlyBase

GO - Biological processi

  • mRNA splicing, via spliceosome Source: FlyBase
  • oogenesis Source: FlyBase
  • regulation of transcription, DNA-templated Source: InterPro

Enzyme and pathway databases

ReactomeiR-DME-72163. mRNA Splicing - Major Pathway.
R-DME-72165. mRNA Splicing - Minor Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Y-box proteinImported
Gene namesi
Name:ypsImported
ORF Names:CG5654Imported
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0022959. yps.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiO46173.
PeptideAtlasiO46173.
PRIDEiO46173.

Expressioni

Gene expression databases

ExpressionAtlasiO46173. differential.

Interactioni

Protein-protein interaction databases

IntActiO46173. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliO46173.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 131CSPInterPro annotationAdd BLAST68

Phylogenomic databases

eggNOGiKOG3070. Eukaryota.
COG1278. LUCA.
OrthoDBiEOG091G0W9A.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiView protein in InterPro
IPR019844. Cold-shock_CS.
IPR011129. CSD.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF00313. CSD. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiView protein in SMART
SM00357. CSP. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00352. COLD_SHOCK. 1 hit.

Sequencei

Sequence statusi: Complete.

O46173-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADAAESKPL AAEQQQQAQQ QPEQQQNPPN PQEQDHEQEP LDELQGQQGQ
60 70 80 90 100
PAPPTKEVIA TKVTGTVKWF NVKSGYGFIN RNDTREDVFV HQSAIANNPK
110 120 130 140 150
KAVRSVGDGE VVEFDVVIGE KGNEAANVTG PSGEPVRGSQ FAADKRRNFR
160 170 180 190 200
PWMKKNRRKD GEVEGEDAES SAQQQQQQAA PIVDGQPQQQ VQSGPRQPRQ
210 220 230 240 250
NFRRGPPGGP PGGPRGGPRG PPGGAPGGPR RYNNYYLRQP RRGLGGGDGS
260 270 280 290 300
AEPGVHDQNP EGLQRGEGQG PRRGGGPPAG PQRRFFRRNF NNGPPPPRRD
310 320 330 340 350
GRIHSRPGTA TPTTATSTSA RGNQMALAVV RSSSQRRTAL KSCKIQPQRA

LHRKGSERI
Length:359
Mass (Da):38,941
Last modified:June 1, 1998 - v1
Checksum:i64CA1D9E144AFF3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U49120 mRNA. Translation: AAB94634.1.

Similar proteinsi

Entry informationi

Entry nameiO46173_DROME
AccessioniPrimary (citable) accession number: O46173
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: September 27, 2017
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)