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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_R11H6.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_R11H6.2Imported, R11H6.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR11H6.2; CE12772; WBGene00011250.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei42 – 6221HelicalSequence analysisAdd
BLAST
Transmembranei92 – 11524HelicalSequence analysisAdd
BLAST
Transmembranei127 – 14721HelicalSequence analysisAdd
BLAST
Transmembranei154 – 17522HelicalSequence analysisAdd
BLAST
Transmembranei195 – 21824HelicalSequence analysisAdd
BLAST
Transmembranei230 – 25223HelicalSequence analysisAdd
BLAST
Transmembranei314 – 33421HelicalSequence analysisAdd
BLAST
Transmembranei377 – 39822HelicalSequence analysisAdd
BLAST
Transmembranei418 – 43720HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 442420Sequence analysisPRO_5004158526Add
BLAST

Proteomic databases

EPDiO45719.
PaxDbiO45719.

Interactioni

Protein-protein interaction databases

STRINGi6239.R11H6.2.2.

Structurei

3D structure databases

ProteinModelPortaliO45719.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
GeneTreeiENSGT00550000074522.
HOGENOMiHOG000165463.
InParanoidiO45719.
OMAiEPERNCN.
PhylomeDBiO45719.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O45719-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGALLAAPFC AASAACCFGS SACSLCCSAC PGAKNSTTTR IMYALMLISA
60 70 80 90 100
TFMAVVMLLP GVQKKLVENK WLCDGLNEYA GVNCEHAIGY QAVYRVCAGA
110 120 130 140 150
ASFFFLFMLL MFGVSSSKDG RSSIQNGFWF FKYLLMFGII GGFFFIGSET
160 170 180 190 200
LATPLMYIGM LGAFLFILIQ LILIVDFAHG LAESQYEDND SRACYAGLLI
210 220 230 240 250
TTFGGFLVCL IAAVYVFINY AIGDGCGLPK FFVIFNVLIC VAISLLSVSP
260 270 280 290 300
MVQEVNPRSG LLQPVVISAY IIYLTWSALL SNPNESCNPT LANVTQSAIP
310 320 330 340 350
TGGVTKDDSF VTPLPVHSLI SLLIWLICLV YASIRNSSNT SLGKITGDNE
360 370 380 390 400
EHVQLNDVEG GKAWDNEEEG VAYSYSFFHF MFCLASLYVM MTLTSWYHPD
410 420 430 440
SDLAHLNSNM ASVWVKMFSS WICGGLYAWT LVAPIIFPDR EF
Length:442
Mass (Da):48,206
Last modified:June 1, 1998 - v1
Checksum:i790A9DF5F782C49E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB07645.1.
PIRiT24196.
RefSeqiNP_506611.1. NM_074210.4.
UniGeneiCel.2782.

Genome annotation databases

EnsemblMetazoaiR11H6.2.1; R11H6.2.1; WBGene00011250.
R11H6.2.2; R11H6.2.2; WBGene00011250.
GeneIDi179964.
KEGGicel:CELE_R11H6.2.
UCSCiR11H6.2.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB07645.1.
PIRiT24196.
RefSeqiNP_506611.1. NM_074210.4.
UniGeneiCel.2782.

3D structure databases

ProteinModelPortaliO45719.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.R11H6.2.2.

Proteomic databases

EPDiO45719.
PaxDbiO45719.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR11H6.2.1; R11H6.2.1; WBGene00011250.
R11H6.2.2; R11H6.2.2; WBGene00011250.
GeneIDi179964.
KEGGicel:CELE_R11H6.2.
UCSCiR11H6.2.1. c. elegans.

Organism-specific databases

CTDi179964.
WormBaseiR11H6.2; CE12772; WBGene00011250.

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
GeneTreeiENSGT00550000074522.
HOGENOMiHOG000165463.
InParanoidiO45719.
OMAiEPERNCN.
PhylomeDBiO45719.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO45719_CAEEL
AccessioniPrimary (citable) accession number: O45719
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: June 8, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.