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Protein
Submitted name:

Serpentine Receptor, class X

Gene

srx-76

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Serpentine Receptor, class XImported
Gene namesi
Name:srx-76Imported
ORF Names:CELE_K12G11.5Imported, K12G11.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiK12G11.5; CE36314; WBGene00005967; srx-76.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 4223HelicalSequence analysisAdd
BLAST
Transmembranei54 – 7421HelicalSequence analysisAdd
BLAST
Transmembranei181 – 20828HelicalSequence analysisAdd
BLAST
Transmembranei228 – 25124HelicalSequence analysisAdd
BLAST
Transmembranei257 – 28125HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiO45689.

Structurei

3D structure databases

ProteinModelPortaliO45689.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 2932707TM_GPCR_SrxInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410KA60. Eukaryota.
ENOG4110IKZ. LUCA.
GeneTreeiENSGT00390000007734.
HOGENOMiHOG000018708.
InParanoidiO45689.
OMAiVMIMFND.
OrthoDBiEOG7QZGG3.
PhylomeDBiO45689.

Family and domain databases

InterProiIPR019430. 7TM_GPCR_serpentine_rcpt_Srx.
[Graphical view]
PfamiPF10328. 7TM_GPCR_Srx. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O45689-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNSEEVYNF RTWPNTVASI LMTINVIFGI LLSSSIVFIY LVDHNEKTSF
60 70 80 90 100
NLMCAMRAFN NIMVMITSFV LVYIPTTILG YNLLPAWLES ILICSSINFY
110 120 130 140 150
MYNEFQSIYI SINRFIAIYF PHHYNKLCGY TATAFISTLL YADRLRNISI
160 170 180 190 200
ETYLRTSKQQ FIIYSSQYLM FSSMDVSGGG IVIMGALMFG IALFANLMTF
210 220 230 240 250
IRISLFYLKS SMRDSRESRG SVRKNMKLFF QTVIQDVLFF IDNLFTFILL
260 270 280 290 300
TLIEHRFWYF ICATFVWQTM HVIDGFVMIM FNDRLSFLKI TLFASSPTQL
310 320
SVVEVSSQRS PARRAPIVIV S
Length:321
Mass (Da):37,220
Last modified:July 5, 2004 - v2
Checksum:iBA968A9902DD6078
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB04605.2.
PIRiT23627.
RefSeqiNP_505993.2. NM_073592.2.
UniGeneiCel.30693.

Genome annotation databases

EnsemblMetazoaiK12G11.5; K12G11.5; WBGene00005967.
GeneIDi187336.
KEGGicel:CELE_K12G11.5.
UCSCiK12G11.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB04605.2.
PIRiT23627.
RefSeqiNP_505993.2. NM_073592.2.
UniGeneiCel.30693.

3D structure databases

ProteinModelPortaliO45689.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO45689.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiK12G11.5; K12G11.5; WBGene00005967.
GeneIDi187336.
KEGGicel:CELE_K12G11.5.
UCSCiK12G11.5. c. elegans.

Organism-specific databases

CTDi187336.
WormBaseiK12G11.5; CE36314; WBGene00005967; srx-76.

Phylogenomic databases

eggNOGiENOG410KA60. Eukaryota.
ENOG4110IKZ. LUCA.
GeneTreeiENSGT00390000007734.
HOGENOMiHOG000018708.
InParanoidiO45689.
OMAiVMIMFND.
OrthoDBiEOG7QZGG3.
PhylomeDBiO45689.

Miscellaneous databases

NextBioi934926.

Family and domain databases

InterProiIPR019430. 7TM_GPCR_serpentine_rcpt_Srx.
[Graphical view]
PfamiPF10328. 7TM_GPCR_Srx. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO45689_CAEEL
AccessioniPrimary (citable) accession number: O45689
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: July 5, 2004
Last modified: December 9, 2015
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.