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Unreviewed, UniProtKB/TrEMBL O45599 (O45599_CAEEL)

Last modified July 13, 2010. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information
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Names and originHide

Protein namesSubmitted name:
Protein H02I12.1, partially confirmed by transcript evidence EMBL CAB07215.2
Gene names
Name:cbd-1 WormBase WBGene00010351 WormBase H02I12.1
ORF Names:H02I12.1 EMBL CAB07215.2
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis
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Protein attributesHide

Sequence length1319 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level.
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Binary interactionsHide

With

Entry

#Exp.

IntAct

Notes

Q9XVA31EBI-319105,EBI-319064
gei-4Q9TZ381EBI-319105,EBI-329192
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SequencesHide

Sequence LengthMass (Da)Tools
O45599-1 [UniParc].

Last modified November 23, 2004. Version 2.
Checksum: 2B50C8656061FB3F

FASTA1,319144,194
        10         20         30         40         50         60 
MGPQLATVSL LLLTFFSNSI QYPHSPAATE CPAYFNGNIA GNACSREYSI CVNGVRQAAT 

        70         80         90        100        110        120 
CSDDSVFYED ECVPVDESPE CRVDENTEED DTPYAEFDCT SKQDGIYSIG CSNQFISCVA 

       130        140        150        160        170        180 
GGAYMAKCPD SLVFNERTQD CRESCDEVKQ DTTTAPQVYE DGEEGYGEAS GEIAGDYERQ 

       190        200        210        220        230        240 
PSNEQPDSID FDCNGLEDGN YADGCNDVFY SCSNNMVFQR YCPPGTVFNI NQQSCDFQCT 

       250        260        270        280        290        300 
TDDPTTTVSY STSTITTPQE DDSEYSSTTS ADVISTTTTP SIDAIETTTT GFDAVTTTTT 

       310        320        330        340        350        360 
TQTPFVCQEG QVNSFGMCSS RFNRCQNNSV RSKQCPVNTL FESSLVMCVF DLPQCQPITV 

       370        380        390        400        410        420 
PAAPAYNSYG PPSDTIVSPF DENVRLKPKF DRRRKYHHGK PSYGPVNGNS YLENPFFIPR 

       430        440        450        460        470        480 
HRGGSHRDHR RYGYGPAIDS PFSTAFRGRA ALSDQFKDYR RARMGKIQGD ARKVDGNKRF 

       490        500        510        520        530        540 
LIDDEFEGPN AKFVESNIEQ VFPKNRHSKK QLGPHEDPDG YDDEKTFDAK DLFGATRRKR 

       550        560        570        580        590        600 
SAYYGTEQSV YGQQSAQISA RQAQVNKDCQ QYTTPTFLTF GDCFDQFIFC SGNGINRMAA 

       610        620        630        640        650        660 
CPIGETFDKT LRSCSETCGV STTIVAVTIG TQTSDDLSAP SEYIENDGVT TQSTWNDQPS 

       670        680        690        700        710        720 
TTQAPNSYES YTTQYSSNDV PSTSAAPIGD RCSLDASGLF SLGCSQKYIQ CSNGAAIVRR 

       730        740        750        760        770        780 
CGESLYFNEA TQECTYRDEV PECGSQGSTS SPVITTPGQD QSSNYYGIPS DDVPSTTQTP 

       790        800        810        820        830        840 
VGDRCAYVAS GLFDLGCSQK YIQCSDSAAS VRECEGSLYF DERSQSCRFR DEVFKCQTAD 

       850        860        870        880        890        900 
VSSSSTVPYL DFTTTPASPS EDEPTTYEPS VAPYIPSVTV NPVDTCTSLS DGTHGTGCSS 

       910        920        930        940        950        960 
FYFVCSHGRL ISSGNCQLGE GYDPSVQGCR TFSEIPARAC DEQEVTTDAG LVQLMPYKTL 

       970        980        990       1000       1010       1020 
EEVLTTTEAA TTVANDGPTD TYITGSTKYS TTDSGEYTIP YGDETTSTRS YDRADNDSED 

      1030       1040       1050       1060       1070       1080 
EEEDDVEHDQ KCTVGSRTPV GFCVRTYLEC TDAGNVEKLC RIGKLFDSHS NRCVPRIGCG 

      1090       1100       1110       1120       1130       1140 
KEAIRDAIKD MIATTPAPAQ PKQFEGRCAH VDGEAVFSIG VCSSKYLRCS YGASKLQQCS 

      1150       1160       1170       1180       1190       1200 
EDRVFSNDKL ECIVRESVSA CTVPKNPSIK KYYTSNDQSA FCDGKEDGLY RNERDCSAIL 

      1210       1220       1230       1240       1250       1260 
QCFGGELFEH PSCQSSLAFN QLTGKCDYPQ KVSGCENHGQ TNGECSEHGS FIADANNCEV 

      1270       1280       1290       1300       1310 
FYRCVWGRKV VMTCPSGTVF NPLLSVCDWP SAVPSCSGQA SDSNSSYGSS TYNDDKSGY

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ReferencesHide

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
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Cross-referencesHide

Sequence databases

EMBL
GenBank
DDBJ		Z92789 Genomic DNA. Translation: CAB07215.2.
PIRT23024.
RefSeqNP_502145.2.
UniGeneCel.17059

3D structure databases

SMRO45599. Positions 1180-1237, 1243-1303.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-26633N.
IntActO45599. 4 interactions.
MINTMINT-1099446.
STRINGO45599.

Protein family/group databases

CAZyCBM14. Carbohydrate-Binding Module Family 14.

Genome annotation databases

EnsemblMetazoaH02I12.1; H02I12.1; H02I12.1.
GeneID178061.
KEGGcel:H02I12.1.
UCSCH02I12.1. c. elegans.

Organism-specific databases

CTD178061.
WormBaseH02I12.1; CE37527; WBGene00010351; cbd-1.

Phylogenomic databases

eggNOGmeNOG26903.
HOGENOMHBG378465.
InParanoidO45599.
OMAFDCNGLE.
PhylomeDBO45599.

Gene expression databases

ArrayExpressO45599.

Family and domain databases

InterProIPR002557. Chitin-bd_peritrophin-A.
[Graphical view]
PfamPF01607. CBM_14. 7 hits.
[Graphical view]
SMARTSM00494. ChtBD2. 12 hits.
[Graphical view]
SUPFAMSSF57625. Chitin_bind_PerA. 9 hits.
PROSITEPS50940. CHIT_BIND_II. 12 hits.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio899552.
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Entry informationHide

Entry nameO45599_CAEEL
AccessionPrimary (citable) accession number: O45599
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: November 23, 2004
Last modified: July 13, 2010
This is version 64 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information