O45599 (O45599_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein CBD-1 EMBL CAB07215.2

Gene names

Name:	cbd-1 WormBase WBGene00010351 WormBase H02I12.1
ORF Names:	H02I12.1 EMBL CAB07215.2

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	1319 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	chitin metabolic process Inferred from electronic annotation. Source: InterPro embryo development ending in birth or egg hatching Inferred from mutant phenotype. Source: WormBase receptor-mediated endocytosis Inferred from mutant phenotype. Source: WormBase reproduction Inferred from mutant phenotype. Source: WormBase
Cellular component	cell periphery Inferred from direct assay. Source: WormBase extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O45599 [UniParc]. Last modified November 23, 2004. Version 2. Checksum: 2B50C8656061FB3F	FASTA	1,319	144,194
	10 20 30 40 50 60 MGPQLATVSL LLLTFFSNSI QYPHSPAATE CPAYFNGNIA GNACSREYSI CVNGVRQAAT 70 80 90 100 110 120 CSDDSVFYED ECVPVDESPE CRVDENTEED DTPYAEFDCT SKQDGIYSIG CSNQFISCVA 130 140 150 160 170 180 GGAYMAKCPD SLVFNERTQD CRESCDEVKQ DTTTAPQVYE DGEEGYGEAS GEIAGDYERQ 190 200 210 220 230 240 PSNEQPDSID FDCNGLEDGN YADGCNDVFY SCSNNMVFQR YCPPGTVFNI NQQSCDFQCT 250 260 270 280 290 300 TDDPTTTVSY STSTITTPQE DDSEYSSTTS ADVISTTTTP SIDAIETTTT GFDAVTTTTT 310 320 330 340 350 360 TQTPFVCQEG QVNSFGMCSS RFNRCQNNSV RSKQCPVNTL FESSLVMCVF DLPQCQPITV 370 380 390 400 410 420 PAAPAYNSYG PPSDTIVSPF DENVRLKPKF DRRRKYHHGK PSYGPVNGNS YLENPFFIPR 430 440 450 460 470 480 HRGGSHRDHR RYGYGPAIDS PFSTAFRGRA ALSDQFKDYR RARMGKIQGD ARKVDGNKRF 490 500 510 520 530 540 LIDDEFEGPN AKFVESNIEQ VFPKNRHSKK QLGPHEDPDG YDDEKTFDAK DLFGATRRKR 550 560 570 580 590 600 SAYYGTEQSV YGQQSAQISA RQAQVNKDCQ QYTTPTFLTF GDCFDQFIFC SGNGINRMAA 610 620 630 640 650 660 CPIGETFDKT LRSCSETCGV STTIVAVTIG TQTSDDLSAP SEYIENDGVT TQSTWNDQPS 670 680 690 700 710 720 TTQAPNSYES YTTQYSSNDV PSTSAAPIGD RCSLDASGLF SLGCSQKYIQ CSNGAAIVRR 730 740 750 760 770 780 CGESLYFNEA TQECTYRDEV PECGSQGSTS SPVITTPGQD QSSNYYGIPS DDVPSTTQTP 790 800 810 820 830 840 VGDRCAYVAS GLFDLGCSQK YIQCSDSAAS VRECEGSLYF DERSQSCRFR DEVFKCQTAD 850 860 870 880 890 900 VSSSSTVPYL DFTTTPASPS EDEPTTYEPS VAPYIPSVTV NPVDTCTSLS DGTHGTGCSS 910 920 930 940 950 960 FYFVCSHGRL ISSGNCQLGE GYDPSVQGCR TFSEIPARAC DEQEVTTDAG LVQLMPYKTL 970 980 990 1000 1010 1020 EEVLTTTEAA TTVANDGPTD TYITGSTKYS TTDSGEYTIP YGDETTSTRS YDRADNDSED 1030 1040 1050 1060 1070 1080 EEEDDVEHDQ KCTVGSRTPV GFCVRTYLEC TDAGNVEKLC RIGKLFDSHS NRCVPRIGCG 1090 1100 1110 1120 1130 1140 KEAIRDAIKD MIATTPAPAQ PKQFEGRCAH VDGEAVFSIG VCSSKYLRCS YGASKLQQCS 1150 1160 1170 1180 1190 1200 EDRVFSNDKL ECIVRESVSA CTVPKNPSIK KYYTSNDQSA FCDGKEDGLY RNERDCSAIL 1210 1220 1230 1240 1250 1260 QCFGGELFEH PSCQSSLAFN QLTGKCDYPQ KVSGCENHGQ TNGECSEHGS FIADANNCEV 1270 1280 1290 1300 1310 FYRCVWGRKV VMTCPSGTVF NPLLSVCDWP SAVPSCSGQA SDSNSSYGSS TYNDDKSGY

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z92789 Genomic DNA. Translation: CAB07215.2.
PIR	T23024.
RefSeq	NP_502145.2. NM_069744.4.
UniGene	Cel.17059.
3D structure databases
ProteinModelPortal	O45599.
SMR	O45599. Positions 114-142, 195-243, 1180-1237, 1245-1297.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-26633N.
IntAct	O45599. 4 interactions.
MINT	MINT-1099446.
STRING	O45599.
Protein family/group databases
CAZy	CBM14. Carbohydrate-Binding Module Family 14.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	H02I12.1.1; H02I12.1.1; H02I12.1. H02I12.1.2; H02I12.1.2; H02I12.1.
GeneID	178061.
KEGG	cel:H02I12.1.
UCSC	H02I12.1. c. elegans.
Organism-specific databases
CTD	178061.
WormBase	H02I12.1; CE37527; WBGene00010351; cbd-1.
Phylogenomic databases
eggNOG	meNOG26903.
GeneTree	EMGT00050000000345.
HOGENOM	HBG378465.
InParanoid	O45599.
OMA	FDCNGLE.
PhylomeDB	O45599.
Gene expression databases
ArrayExpress	O45599.
Family and domain databases
InterPro	IPR002557. Chitin-bd_dom. [Graphical view]
Gene3D	G3DSA:2.170.140.10. Chitin-bd_dom. 8 hits.
Pfam	PF01607. CBM_14. 7 hits. [Graphical view]
SMART	SM00494. ChtBD2. 12 hits. [Graphical view]
SUPFAM	SSF57625. Chitin_bind_PerA. 8 hits.
PROSITE	PS50940. CHIT_BIND_II. 12 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	899552.

Entry information

Entry name

O45599_CAEEL

Accession

Primary (citable) accession number: O45599

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 76 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)