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Protein
Submitted name:

Chitin-Binding Domain protein

Gene

cbd-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.

Names & Taxonomyi

Protein namesi
Submitted name:
Chitin-Binding Domain proteinImported
Gene namesi
Name:cbd-1Imported
ORF Names:CELE_H02I12.1Imported, H02I12.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiH02I12.1; CE37527; WBGene00010351; cbd-1.

Subcellular locationi

GO - Cellular componenti

  • cell periphery Source: WormBase
  • extracellular region Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500415835122 – 1319Sequence analysisAdd BLAST1298

Proteomic databases

EPDiO45599.
PaxDbiO45599.
PeptideAtlasiO45599.

Expressioni

Gene expression databases

BgeeiWBGene00010351.

Interactioni

Protein-protein interaction databases

DIPiDIP-26633N.
IntActiO45599. 4 interactors.
MINTiMINT-1099446.
STRINGi6239.H02I12.1.2.

Structurei

3D structure databases

ProteinModelPortaliO45599.
SMRiO45599.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 83Chitin-binding type-2InterPro annotationAdd BLAST56
Domaini96 – 141Chitin-binding type-2InterPro annotationAdd BLAST46
Domaini190 – 236Chitin-binding type-2InterPro annotationAdd BLAST47
Domaini304 – 357Chitin-binding type-2InterPro annotationAdd BLAST54
Domaini566 – 614Chitin-binding type-2InterPro annotationAdd BLAST49
Domaini689 – 745Chitin-binding type-2InterPro annotationAdd BLAST57
Domaini782 – 838Chitin-binding type-2InterPro annotationAdd BLAST57
Domaini883 – 942Chitin-binding type-2InterPro annotationAdd BLAST60
Domaini1029 – 1081Chitin-binding type-2InterPro annotationAdd BLAST53
Domaini1105 – 1163Chitin-binding type-2InterPro annotationAdd BLAST59
Domaini1179 – 1237Chitin-binding type-2InterPro annotationAdd BLAST59
Domaini1242 – 1298Chitin-binding type-2InterPro annotationAdd BLAST57

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J1SU. Eukaryota.
ENOG41121EJ. LUCA.
GeneTreeiENSGT00650000093766.
HOGENOMiHOG000016451.
InParanoidiO45599.
OMAiILQCFGG.
OrthoDBiEOG091G0LTG.

Family and domain databases

Gene3Di2.170.140.10. 8 hits.
InterProiIPR002557. Chitin-bd_dom.
[Graphical view]
PfamiPF01607. CBM_14. 7 hits.
[Graphical view]
SMARTiSM00494. ChtBD2. 12 hits.
[Graphical view]
SUPFAMiSSF57625. SSF57625. 8 hits.
PROSITEiPS50940. CHIT_BIND_II. 12 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O45599-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPQLATVSL LLLTFFSNSI QYPHSPAATE CPAYFNGNIA GNACSREYSI
60 70 80 90 100
CVNGVRQAAT CSDDSVFYED ECVPVDESPE CRVDENTEED DTPYAEFDCT
110 120 130 140 150
SKQDGIYSIG CSNQFISCVA GGAYMAKCPD SLVFNERTQD CRESCDEVKQ
160 170 180 190 200
DTTTAPQVYE DGEEGYGEAS GEIAGDYERQ PSNEQPDSID FDCNGLEDGN
210 220 230 240 250
YADGCNDVFY SCSNNMVFQR YCPPGTVFNI NQQSCDFQCT TDDPTTTVSY
260 270 280 290 300
STSTITTPQE DDSEYSSTTS ADVISTTTTP SIDAIETTTT GFDAVTTTTT
310 320 330 340 350
TQTPFVCQEG QVNSFGMCSS RFNRCQNNSV RSKQCPVNTL FESSLVMCVF
360 370 380 390 400
DLPQCQPITV PAAPAYNSYG PPSDTIVSPF DENVRLKPKF DRRRKYHHGK
410 420 430 440 450
PSYGPVNGNS YLENPFFIPR HRGGSHRDHR RYGYGPAIDS PFSTAFRGRA
460 470 480 490 500
ALSDQFKDYR RARMGKIQGD ARKVDGNKRF LIDDEFEGPN AKFVESNIEQ
510 520 530 540 550
VFPKNRHSKK QLGPHEDPDG YDDEKTFDAK DLFGATRRKR SAYYGTEQSV
560 570 580 590 600
YGQQSAQISA RQAQVNKDCQ QYTTPTFLTF GDCFDQFIFC SGNGINRMAA
610 620 630 640 650
CPIGETFDKT LRSCSETCGV STTIVAVTIG TQTSDDLSAP SEYIENDGVT
660 670 680 690 700
TQSTWNDQPS TTQAPNSYES YTTQYSSNDV PSTSAAPIGD RCSLDASGLF
710 720 730 740 750
SLGCSQKYIQ CSNGAAIVRR CGESLYFNEA TQECTYRDEV PECGSQGSTS
760 770 780 790 800
SPVITTPGQD QSSNYYGIPS DDVPSTTQTP VGDRCAYVAS GLFDLGCSQK
810 820 830 840 850
YIQCSDSAAS VRECEGSLYF DERSQSCRFR DEVFKCQTAD VSSSSTVPYL
860 870 880 890 900
DFTTTPASPS EDEPTTYEPS VAPYIPSVTV NPVDTCTSLS DGTHGTGCSS
910 920 930 940 950
FYFVCSHGRL ISSGNCQLGE GYDPSVQGCR TFSEIPARAC DEQEVTTDAG
960 970 980 990 1000
LVQLMPYKTL EEVLTTTEAA TTVANDGPTD TYITGSTKYS TTDSGEYTIP
1010 1020 1030 1040 1050
YGDETTSTRS YDRADNDSED EEEDDVEHDQ KCTVGSRTPV GFCVRTYLEC
1060 1070 1080 1090 1100
TDAGNVEKLC RIGKLFDSHS NRCVPRIGCG KEAIRDAIKD MIATTPAPAQ
1110 1120 1130 1140 1150
PKQFEGRCAH VDGEAVFSIG VCSSKYLRCS YGASKLQQCS EDRVFSNDKL
1160 1170 1180 1190 1200
ECIVRESVSA CTVPKNPSIK KYYTSNDQSA FCDGKEDGLY RNERDCSAIL
1210 1220 1230 1240 1250
QCFGGELFEH PSCQSSLAFN QLTGKCDYPQ KVSGCENHGQ TNGECSEHGS
1260 1270 1280 1290 1300
FIADANNCEV FYRCVWGRKV VMTCPSGTVF NPLLSVCDWP SAVPSCSGQA
1310
SDSNSSYGSS TYNDDKSGY
Length:1,319
Mass (Da):144,194
Last modified:November 23, 2004 - v2
Checksum:i2B50C8656061FB3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB07215.2.
PIRiT23024.
RefSeqiNP_502145.2. NM_069744.5.
UniGeneiCel.17059.

Genome annotation databases

EnsemblMetazoaiH02I12.1; H02I12.1; WBGene00010351.
GeneIDi178061.
KEGGicel:CELE_H02I12.1.
UCSCiH02I12.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB07215.2.
PIRiT23024.
RefSeqiNP_502145.2. NM_069744.5.
UniGeneiCel.17059.

3D structure databases

ProteinModelPortaliO45599.
SMRiO45599.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26633N.
IntActiO45599. 4 interactors.
MINTiMINT-1099446.
STRINGi6239.H02I12.1.2.

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.

Proteomic databases

EPDiO45599.
PaxDbiO45599.
PeptideAtlasiO45599.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiH02I12.1; H02I12.1; WBGene00010351.
GeneIDi178061.
KEGGicel:CELE_H02I12.1.
UCSCiH02I12.1. c. elegans.

Organism-specific databases

CTDi178061.
WormBaseiH02I12.1; CE37527; WBGene00010351; cbd-1.

Phylogenomic databases

eggNOGiENOG410J1SU. Eukaryota.
ENOG41121EJ. LUCA.
GeneTreeiENSGT00650000093766.
HOGENOMiHOG000016451.
InParanoidiO45599.
OMAiILQCFGG.
OrthoDBiEOG091G0LTG.

Gene expression databases

BgeeiWBGene00010351.

Family and domain databases

Gene3Di2.170.140.10. 8 hits.
InterProiIPR002557. Chitin-bd_dom.
[Graphical view]
PfamiPF01607. CBM_14. 7 hits.
[Graphical view]
SMARTiSM00494. ChtBD2. 12 hits.
[Graphical view]
SUPFAMiSSF57625. SSF57625. 8 hits.
PROSITEiPS50940. CHIT_BIND_II. 12 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO45599_CAEEL
AccessioniPrimary (citable) accession number: O45599
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: November 23, 2004
Last modified: November 30, 2016
This is version 111 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.