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Protein
Submitted name:

THaumatiN family

Gene

thn-4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
THaumatiN familyImported
Gene namesi
Name:thn-4Imported
ORF Names:CELE_F49A5.6Imported, F49A5.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF49A5.6; CE16069; WBGene00009858; thn-4.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 233214Sequence analysisPRO_5004158345Add
BLAST

Proteomic databases

PaxDbiO45533.

Structurei

3D structure databases

ProteinModelPortaliO45533.
SMRiO45533. Positions 24-233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IYET. Eukaryota.
ENOG4111KEV. LUCA.
GeneTreeiENSGT00390000012004.
HOGENOMiHOG000238454.
InParanoidiO45533.
OMAiANFNCET.
OrthoDBiEOG7X0VJV.
PhylomeDBiO45533.

Family and domain databases

Gene3Di2.60.110.10. 1 hit.
InterProiIPR001938. Thaumatin.
[Graphical view]
PfamiPF00314. Thaumatin. 1 hit.
[Graphical view]
PIRSFiPIRSF002703. Thaumatin. 1 hit.
PRINTSiPR00347. THAUMATIN.
SMARTiSM00205. THN. 1 hit.
[Graphical view]
SUPFAMiSSF49870. SSF49870. 1 hit.
PROSITEiPS51367. THAUMATIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O45533-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALAQLIFAV SLLALGAETR KITIYNRCPF TIWPGIQGPG NPAGGGFTLH
60 70 80 90 100
SEHSRDITVS DSWTAGRIWA RTGCDANFNC ETGFCGNSEQ CNGAGGVPPA
110 120 130 140 150
SLAEFTLNGR AGQDFYDVSM VDGYNIPVFI QPHGVSGCHR AGGCVTDMNA
160 170 180 190 200
NCPGDLIVRG RDGRVVACKS ACLKYQSDRE CCRNEYNNPR TCTRSALAQL
210 220 230
FKNACPTAYS YAYDDASSTF TCQPSASYTV QFC
Length:233
Mass (Da):25,009
Last modified:June 1, 1998 - v1
Checksum:iFB4704323FEBB823
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB04418.1.
PIRiT22396.
RefSeqiNP_507263.1. NM_074862.1.
UniGeneiCel.33055.

Genome annotation databases

EnsemblMetazoaiF49A5.6; F49A5.6; WBGene00009858.
GeneIDi186006.
KEGGicel:CELE_F49A5.6.
UCSCiF49A5.6. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB04418.1.
PIRiT22396.
RefSeqiNP_507263.1. NM_074862.1.
UniGeneiCel.33055.

3D structure databases

ProteinModelPortaliO45533.
SMRiO45533. Positions 24-233.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO45533.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF49A5.6; F49A5.6; WBGene00009858.
GeneIDi186006.
KEGGicel:CELE_F49A5.6.
UCSCiF49A5.6. c. elegans.

Organism-specific databases

CTDi186006.
WormBaseiF49A5.6; CE16069; WBGene00009858; thn-4.

Phylogenomic databases

eggNOGiENOG410IYET. Eukaryota.
ENOG4111KEV. LUCA.
GeneTreeiENSGT00390000012004.
HOGENOMiHOG000238454.
InParanoidiO45533.
OMAiANFNCET.
OrthoDBiEOG7X0VJV.
PhylomeDBiO45533.

Family and domain databases

Gene3Di2.60.110.10. 1 hit.
InterProiIPR001938. Thaumatin.
[Graphical view]
PfamiPF00314. Thaumatin. 1 hit.
[Graphical view]
PIRSFiPIRSF002703. Thaumatin. 1 hit.
PRINTSiPR00347. THAUMATIN.
SMARTiSM00205. THN. 1 hit.
[Graphical view]
SUPFAMiSSF49870. SSF49870. 1 hit.
PROSITEiPS51367. THAUMATIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO45533_CAEEL
AccessioniPrimary (citable) accession number: O45533
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: June 8, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.