O45189 (O45189_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein SUP-12, isoform a EMBL CCD71425.1

Gene names

Name:	sup-12 WormBase WBGene00006321 WormBase T22B2.4a
ORF Names:	T22B2.4 EMBL CCD71425.1

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	248 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	locomotion Inferred from genetic interaction. Source: WormBase regulation of actin cytoskeleton organization Inferred from genetic interaction. Source: WormBase regulation of mRNA processing Inferred from mutant phenotype. Source: WormBase
Cellular component	nucleus Inferred from direct assay. Source: WormBase
Molecular function	mRNA binding Inferred from physical interaction. Source: WormBase nucleotide binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
asd-1	Q22030	2	EBI-312079,EBI-312085

Sequences

	Sequence		Length	Mass (Da)
	O45189 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 93EB1C8B7EBF25F4	FASTA	248	26,775
	10 20 30 40 50 60 MYGQVQDPLV HAAAAALAQS TNAEPVVGSR DTMFTKIFVG GLPYHTSDKT LHEYFEQFGD 70 80 90 100 110 120 IEEAVVITDR NTQKSRGYGF VTMKDRASAE RACKDPNPII DGRKANVNLA YLGAKPRTNV 130 140 150 160 170 180 QLAALAAGQV QLPLTTQLQA LFQPRMGLPQ MYYPTVTGLV NPLMAQQGAA AQQQLFDYNA 190 200 210 220 230 240 LAAVMNPQAA AAYGIQSQGK FAAAPTTIEQ YAAYPAGYGL VPQSAYNIGN PQLQQLAAAQ QQLEHQRV

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO081409 Genomic DNA. Translation: CCD71425.1.
PIR	T33034.
RefSeq	NP_508674.1. NM_076273.3.
UniGene	Cel.4999.
3D structure databases
HSSP	HSSP built from PDB template 1L3K based on UniProtKB P09651.
ProteinModelPortal	O45189.
SMR	O45189. Positions 30-118.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-24970N.
IntAct	O45189. 5 interactions.
MINT	MINT-1047167.
STRING	O45189.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	T22B2.4a; T22B2.4a; T22B2.4.
GeneID	180674.
KEGG	cel:T22B2.4.
NMPDR	fig|6239.3.peg.22976.
UCSC	T22B2.4. c. elegans.
Organism-specific databases
CTD	180674.
WormBase	T22B2.4a; CE13934; WBGene00006321; sup-12.
Phylogenomic databases
eggNOG	meNOG13527.
GeneTree	EMGT00050000003359.
HOGENOM	HBG756718.
InParanoid	O45189.
OMA	DRNTQKS.
PhylomeDB	O45189.
Gene expression databases
ArrayExpress	O45189.
Family and domain databases
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
Pfam	PF00076. RRM_1. 1 hit. [Graphical view]
SMART	SM00360. RRM. 1 hit. [Graphical view]
PROSITE	PS50102. RRM. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	910400.

Entry information

Entry name

O45189_CAEEL

Accession

Primary (citable) accession number: O45189

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	January 25, 2012
This is version 86 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)