O44737 (O44737_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein XPG-1 EMBL CCD71482.1

Gene names

Name:	xpg-1 EMBL CCD71482.1 WormBase F57B10.6
ORF Names:	CELE_F57B10.6 EMBL CCD71482.1

Organism

Caenorhabditis elegans [Reference proteome] EMBL CCD71482.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	820 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro nuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O44737 [UniParc]. Last modified February 8, 2011. Version 2. Checksum: F03035792A6D444A	FASTA	820	94,139
	10 20 30 40 50 60 MGITGLWKIV EPTATEIPLE CLEGKKLAID VSIWIYQAQL AYPSDQPFPH LRLLVNRLSK 70 80 90 100 110 120 LLFYKIRPVF VFDGPQVPPL KRQVLEARRQ KRQNDDDILK NSKKMGKLKE IASGGLDDVA 130 140 150 160 170 180 LANAIKEVIS PSKKVILNDI YKDIPSTSTY LDKPSAHQND QLVYGNIEDS DSDDSDIIIV 190 200 210 220 230 240 PTVKEERISK QFTSRKLEIQ SLVEKREIMR NSRLRPDMIP QDSKSFSNFQ MQRLLRRGRL 250 260 270 280 290 300 NAEIEQLAKS TTTSTGGYSS DKINVTGPDG TSHILKYAHS DEIQEVRPEL KRDIDSLYQE 310 320 330 340 350 360 PLSMTLDFFN VEYGGKKLSR EVTPDDVREE IVDRLEERLI DKKERGYQSK SGMLEAIARK 370 380 390 400 410 420 RIRQHYGTET VEDKKEEEKR KKEQRIEDDM IEVSDDEMVL QEVLLETAAK SLDKRMASLE 430 440 450 460 470 480 KHKVPSEDEE IEWDPQRYDK PSTSSAPALM EDYIHLNYSD EDDKTPELYR DLQEFLTNAG 490 500 510 520 530 540 IPWIESPGEA EAQCVELERL GLVDGVVSDD SDVWAFGAQH VYRHMFSKNR RVQRYGEQTT 550 560 570 580 590 600 ANRDNCKLFC LQREDYISIA LLSGGDYCAG LVKVGAIGAL ELVSEYVECR IDNTNDLKVI 610 620 630 640 650 660 ENRIMRLLKN VESLFLTAPD DKRVASRNAM MLRRHVTEAN DMENIKCVCS NQDAVHAYLH 670 680 690 700 710 720 PIVDSSSEKL RWRQMNIPLI RRILHQRLQW PDRKQHNEEQ NSFDAFEKWN NFLKSGGQSQ 730 740 750 760 770 780 MRLDRFFAQK LDSSLELKWS KKIVEALDKI GQRVAGTMKN NEMSKEKKVD KQIKKSKTAV 790 800 810 820 KRVTRARGIG RGKGGALLVP ANSKLNLSEE SSSNDSFDEF

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CCD71482.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO081416 Genomic DNA. Translation: CCD71482.1.
RefSeq	NP_491891.2. NM_059490.2.
3D structure databases
ProteinModelPortal	O44737.
SMR	O44737. Positions 16-179, 465-652.
ModBase	Search...
Protein-protein interaction databases
STRING	6239.F57B10.6. O44737.
Proteomic databases
PaxDb	O44737.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	F57B10.6; F57B10.6; F57B10.6.
GeneID	186441.
KEGG	cel:CELE_F57B10.6.
UCSC	F57B10.6. c. elegans.
Organism-specific databases
CTD	186441.
WormBase	F57B10.6; CE45535; WBGene00019004; xpg-1.
Phylogenomic databases
eggNOG	COG0258.
GeneTree	ENSGT00640000091542.
HOGENOM	HOG000019794.
InParanoid	O44737.
OMA	MIPQDSK.
Family and domain databases
InterPro	IPR020045. 5-3_exonuclease_C. IPR008918. HhH2. IPR006086. XPG-I_dom. IPR006084. XPG/Rad2. IPR006085. XPG_DNA_repair_N. [Graphical view]
PANTHER	PTHR11081. PTHR11081. 1 hit.
Pfam	PF00867. XPG_I. 1 hit. PF00752. XPG_N. 1 hit. [Graphical view]
PRINTS	PR00853. XPGRADSUPER.
SMART	SM00279. HhH2. 1 hit. SM00484. XPGI. 1 hit. SM00485. XPGN. 1 hit. [Graphical view]
SUPFAM	SSF47807. 5_3_exo_C. 1 hit.
ProtoNet	Search...
Other
NextBio	931854.

Entry information

Entry name

O44737_CAEEL

Accession

Primary (citable) accession number: O44737

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 92 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)