Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

CalPoNin

Gene

cpn-4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
CalPoNinImported
Gene namesi
Name:cpn-4Imported
ORF Names:CELE_F49D11.8Imported, F49D11.8Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF49D11.8; CE17082; WBGene00000780; cpn-4.

PTM / Processingi

Proteomic databases

EPDiO44727.
PaxDbiO44727.
PRIDEiO44727.

Interactioni

Protein-protein interaction databases

STRINGi6239.F49D11.8.

Structurei

3D structure databases

ProteinModelPortaliO44727.
SMRiO44727. Positions 11-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 135109Actin-bindingInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2046. Eukaryota.
COG5199. LUCA.
GeneTreeiENSGT00550000074447.
HOGENOMiHOG000232113.
InParanoidiO44727.
OMAiNFNCLEN.
PhylomeDBiO44727.

Family and domain databases

Gene3Di1.10.418.10. 1 hit.
InterProiIPR001715. CH-domain.
IPR003096. SM22_calponin.
[Graphical view]
PfamiPF00307. CH. 1 hit.
[Graphical view]
PRINTSiPR00888. SM22CALPONIN.
SMARTiSM00033. CH. 1 hit.
[Graphical view]
SUPFAMiSSF47576. SSF47576. 1 hit.
PROSITEiPS50021. CH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O44727-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQSYHRPRP AGMAGAILDK QASKFNDVEA GYLLEWIRDL TKEDFDCEAS
60 70 80 90 100
RDNFREQLKD GQRLCKLVNA IKAGSVKKIM KPISNFNCLE NINQFSTAAR
110 120 130 140 150
SLGVKDEETF QSVDLFDGRD LFSVTVTLQS LARKVEKLGI TPPKQVSKDQ

IVNQ
Length:154
Mass (Da):17,342
Last modified:June 1, 2003 - v3
Checksum:i317CE7AD6E745A00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD71537.1.
PIRiT37200.
RefSeqiNP_492849.3. NM_060448.3.
UniGeneiCel.20724.

Genome annotation databases

EnsemblMetazoaiF49D11.8; F49D11.8; WBGene00000780.
GeneIDi172996.
KEGGicel:CELE_F49D11.8.
UCSCiF49D11.8. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD71537.1.
PIRiT37200.
RefSeqiNP_492849.3. NM_060448.3.
UniGeneiCel.20724.

3D structure databases

ProteinModelPortaliO44727.
SMRiO44727. Positions 11-136.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F49D11.8.

Proteomic databases

EPDiO44727.
PaxDbiO44727.
PRIDEiO44727.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF49D11.8; F49D11.8; WBGene00000780.
GeneIDi172996.
KEGGicel:CELE_F49D11.8.
UCSCiF49D11.8. c. elegans.

Organism-specific databases

CTDi172996.
WormBaseiF49D11.8; CE17082; WBGene00000780; cpn-4.

Phylogenomic databases

eggNOGiKOG2046. Eukaryota.
COG5199. LUCA.
GeneTreeiENSGT00550000074447.
HOGENOMiHOG000232113.
InParanoidiO44727.
OMAiNFNCLEN.
PhylomeDBiO44727.

Family and domain databases

Gene3Di1.10.418.10. 1 hit.
InterProiIPR001715. CH-domain.
IPR003096. SM22_calponin.
[Graphical view]
PfamiPF00307. CH. 1 hit.
[Graphical view]
PRINTSiPR00888. SM22CALPONIN.
SMARTiSM00033. CH. 1 hit.
[Graphical view]
SUPFAMiSSF47576. SSF47576. 1 hit.
PROSITEiPS50021. CH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO44727_CAEEL
AccessioniPrimary (citable) accession number: O44727
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 2003
Last modified: June 8, 2016
This is version 101 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.