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Protein
Submitted name:

Prion-like-(Q/N-rich)-domain-bearing protein

Gene

pqn-54

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Keywordsi

Molecular functionPrionImported

Names & Taxonomyi

Protein namesi
Submitted name:
Prion-like-(Q/N-rich)-domain-bearing proteinImported
Gene namesi
Name:pqn-54Imported
ORF Names:CELE_R09B5.5Imported, R09B5.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR09B5.5; CE12626; WBGene00004139; pqn-54.

Subcellular locationi

    Keywords - Cellular componenti

    Amyloid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Signal peptidei1 – 19Sequence analysisAdd BLAST19
    ChainiPRO_500415837220 – 388Sequence analysisAdd BLAST369

    Proteomic databases

    PaxDbiO44606.

    Expressioni

    Gene expression databases

    BgeeiWBGene00004139.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    sgt-1Q217463EBI-325936,EBI-312019

    Protein-protein interaction databases

    DIPiDIP-25031N.
    IntActiO44606. 26 interactors.
    MINTiMINT-1038880.
    STRINGi6239.R09B5.5.

    Structurei

    3D structure databases

    ProteinModelPortaliO44606.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalSequence analysis

    Phylogenomic databases

    eggNOGiENOG410K8ZX. Eukaryota.
    ENOG4110JUS. LUCA.
    GeneTreeiENSGT00700000104617.
    HOGENOMiHOG000018610.
    OMAiCRPNYVI.
    PhylomeDBiO44606.

    Sequencei

    Sequence statusi: Complete.

    O44606-1 [UniParc]FASTAAdd to basket

    « Hide

            10         20         30         40         50
    MRFTSLAIAF FACALVVSGN VLREKRQCGC AQPQQSQCSC QQVQQTQSCS
    60 70 80 90 100
    CQSAPVQQQS PSCSCAQPQQ TQNVQVQTTQ CAPACQQSCT QQCQAAPSVA
    110 120 130 140 150
    QCQPQCQQQC QSQCAPMYNP PATTTPAPVV QCQPMCQQQC QSTCVQQQQP
    160 170 180 190 200
    ASQCQPQCQQ QCNVACDAPA TSTQAPQVVH IQLEIQQAQA QCQPQCQQQC
    210 220 230 240 250
    QSSCTQQQQP ANQCNSACNS QCSNICQQTA QATQQVYNQN SNTNTQMYNP
    260 270 280 290 300
    YNNNNQGSGS ANCAPACQPA CDNSCTSQTP APMYNPYDAS TSAPASSQAV
    310 320 330 340 350
    IQIVLQSSVA QSSQCTPQCE QSCQQQCVQQ QQPAAQCQSA CQDSCSSSCQ
    360 370 380
    AAQPATTACQ QSPQSPQNSC SCQANYSPCG NGQCCRRK
    Length:388
    Mass (Da):41,440
    Last modified:June 1, 1998 - v1
    Checksum:iEA9C34AA4EABFE46
    GO

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    BX284605 Genomic DNA. Translation: CCD68881.1.
    PIRiA88949.
    RefSeqiNP_503423.1. NM_071022.5.
    UniGeneiCel.2829.

    Genome annotation databases

    EnsemblMetazoaiR09B5.5; R09B5.5; WBGene00004139.
    GeneIDi187728.
    KEGGicel:CELE_R09B5.5.
    UCSCiR09B5.5. c. elegans.

    Similar proteinsi

    Entry informationi

    Entry nameiO44606_CAEEL
    AccessioniPrimary (citable) accession number: O44606
    Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
    Last sequence update: June 1, 1998
    Last modified: October 25, 2017
    This is version 105 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported