O43613 (OX1R_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 106.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Orexin receptor type 1 Short name=Ox-1-R Short name=Ox1-R Short name=Ox1R Alternative name(s): Hypocretin receptor type 1 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 425 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | Moderately selective excitatory receptor for orexin-A and, with a lower affinity, for orexin-B neuropeptide. Seems to be exclusively coupled to the G(q) subclass of heteromeric G proteins, which activates the phospholipase C mediated signaling cascade By similarity. |
| Subcellular location | |
| Sequence similarities | Belongs to the G-protein coupled receptor 1 family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cell membrane Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | Transmembrane Transmembrane helix |
| Molecular function | G-protein coupled receptor Receptor Transducer |
| PTM | Glycoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | feeding behavior Traceable author statement Ref.1. Source: ProtInc neuropeptide signaling pathwayTraceable author statement Ref.1. Source: ProtInc synaptic transmissionTraceable author statement Ref.1. Source: ProtInc |
| Cellular_component | integral to plasma membrane Traceable author statement Ref.1. Source: ProtInc |
| Molecular_function | G-protein coupled receptor activity Traceable author statement Ref.1. Source: ProtInc orexin receptor activityInferred from electronic annotation. Source: InterPro peptide hormone bindingInferred from electronic annotation. Source: Compara |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 425 | 425 | Orexin receptor type 1 | PRO_0000069984 | |||||
Regions | |||||||||
| Topological domain | 1 – 46 | 46 | Extracellular Potential | ||||||
| Transmembrane | 47 – 67 | 21 | Helical; Name=1; Potential | ||||||
| Topological domain | 68 – 80 | 13 | Cytoplasmic Potential | ||||||
| Transmembrane | 81 – 102 | 22 | Helical; Name=2; Potential | ||||||
| Topological domain | 103 – 119 | 17 | Extracellular Potential | ||||||
| Transmembrane | 120 – 142 | 23 | Helical; Name=3; Potential | ||||||
| Topological domain | 143 – 164 | 22 | Cytoplasmic Potential | ||||||
| Transmembrane | 165 – 185 | 21 | Helical; Name=4; Potential | ||||||
| Topological domain | 186 – 216 | 31 | Extracellular Potential | ||||||
| Transmembrane | 217 – 239 | 23 | Helical; Name=5; Potential | ||||||
| Topological domain | 240 – 298 | 59 | Cytoplasmic Potential | ||||||
| Transmembrane | 299 – 321 | 23 | Helical; Name=6; Potential | ||||||
| Topological domain | 322 – 336 | 15 | Extracellular Potential | ||||||
| Transmembrane | 337 – 360 | 24 | Helical; Name=7; Potential | ||||||
| Topological domain | 361 – 425 | 65 | Cytoplasmic Potential | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 194 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Natural variant | 167 | 1 | G → S. Ref.3 | VAR_044505 | |||||
| Natural variant | 279 | 1 | R → Q. Ref.3 Corresponds to variant rs7516785 [ dbSNP | Ensembl ]. | VAR_033480 | |||||
| Natural variant | 281 | 1 | R → H. Ref.3 Corresponds to variant rs41439244 [ dbSNP | Ensembl ]. | VAR_044506 | |||||
| Natural variant | 408 | 1 | I → V. Ref.3 Ref.5 Corresponds to variant rs2271933 [ dbSNP | Ensembl ]. | VAR_022063 | |||||
Experimental info | |||||||||
| Sequence conflict | 280 | 1 | A → G in AAC39601. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Orexins and orexin receptors: a family of hypothalamic neuropeptides and G protein-coupled receptors that regulate feeding behavior." Sakurai T., Amemiya A., Ishii M., Matsuzaki I., Chemelli R.M., Tanaka H., Williams S.C., Richardson J.A., Kozlowski G.P., Wilson S., Arch J.R.S., Buckingham R.E., Haynes A.C., Carr S.A., Annan R.S., McNulty D.E., Liu W.-S., Terrett J.A. Yanagisawa M.Cell 92:573-585(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "A mutation in a case of early onset narcolepsy and a generalized absence of hypocretin peptides in human narcoleptic brains." Peyron C., Faraco J., Rogers W., Ripley B., Overeem S., Charnay Y., Nevsimalova S., Aldrich M., Reynolds D., Albin R., Li R., Hungs M., Pedrazzoli M., Padigaru M., Kucherlapati M., Fan J., Maki R., Lammers G.J. Mignot E.Nat. Med. 6:991-997(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "Polymorphisms in hypocretin/orexin pathway genes and narcolepsy." Olafsdottir B.R., Rye D.B., Scammell T.E., Matheson J.K., Stefansson K., Gulcher J.R. Neurology 57:1896-1899(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS SER-167; GLN-279; HIS-281 AND VAL-408. |
| [4] | "Genomic sequence of the hypocretin (orexin) receptor 1 (HCRTR1)." Yeager M., Welch R., Haque K., Bergen A. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT VAL-408. Tissue: Brain. |
| [6] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [9] | "Hypocretin/orexin, sleep and narcolepsy." Hungs M., Mignot E. Bioessays 23:397-408(2001) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [10] | "To eat or to sleep? Orexin in the regulation of feeding and wakefulness." Willie J.T., Chemelli R.M., Sinton C.M., Yanagisawa M. Annu. Rev. Neurosci. 24:429-458(2001) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF041243 mRNA. Translation: AAC39601.1. AF202084 AF202083 Genomic DNA. Translation: AAG28020.1.AY062030 Genomic DNA. Translation: AAL47214.1. AY070269 Genomic DNA. Translation: AAL50221.1. AK290521 mRNA. Translation: BAF83210.1. AC114488 Genomic DNA. No translation available. CH471059 Genomic DNA. Translation: EAX07602.1. BC074796 mRNA. Translation: AAH74796.1. |
| IPI | IPI00013375. |
| RefSeq | NP_001516.2. NM_001525.2. |
| UniGene | Hs.388226. |
3D structure databases | |
| ProteinModelPortal | O43613. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000362810. |
Protein family/group databases | |
| GPCRDB | Search... |
PTM databases | |
| PhosphoSite | O43613. |
Proteomic databases | |
| PaxDb | O43613. |
| PRIDE | O43613. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000373706; ENSP00000362810; ENSG00000121764. ENST00000403528; ENSP00000384387; ENSG00000121764. |
| GeneID | 3061. |
| KEGG | hsa:3061. |
| UCSC | uc001btc.4. human. |
Organism-specific databases | |
| CTD | 3061. |
| GeneCards | GC01P032083. |
| HGNC | HGNC:4848. HCRTR1. |
| HPA | HPA014018. |
| MIM | 602392. gene. |
| neXtProt | NX_O43613. |
| PharmGKB | PA29222. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG253280. |
| HOGENOM | HOG000230498. |
| HOVERGEN | HBG101173. |
| InParanoid | O43613. |
| KO | K04238. |
| OMA | RDYLYPK. |
| OrthoDB | EOG4JM7PV. |
| PhylomeDB | O43613. |
Enzyme and pathway databases | |
| Reactome | REACT_111102. Signal Transduction. |
Gene expression databases | |
| ArrayExpress | O43613. |
| Bgee | O43613. |
| CleanEx | HS_HCRTR1. |
| Genevestigator | O43613. |
| GermOnline | ENSG00000121764. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000276. GPCR_Rhodpsn. IPR017452. GPCR_Rhodpsn_7TM. IPR000204. Orexin_rcpt. IPR004059. Orexin_rcpt_1. [Graphical view] |
| Pfam | PF00001. 7tm_1. 1 hit. [Graphical view] |
| PRINTS | PR00237. GPCRRHODOPSN. PR01521. OREXIN1R. PR01064. OREXINR. |
| PROSITE | PS00237. G_PROTEIN_RECEP_F1_1. 1 hit. PS50262. G_PROTEIN_RECEP_F1_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | O43613. |
| ChEMBL | CHEMBL5113. |
| GenomeRNAi | 3061. |
| NextBio | 12111. |
| SOURCE | Search... |
Entry information
| Entry name | OX1R_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O43613 Secondary accession number(s): A8K3A6, Q9HBV6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| 7-transmembrane G-linked receptors List of 7-transmembrane G-linked receptor entries |
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
