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Protein

Protein csh3

Gene

csh3

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein csh3
Gene namesi
Name:csh3
ORF Names:SPBC119.05c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC119.05c.
PomBaseiSPBC119.05c.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296Protein csh3PRO_0000079396Add
BLAST

Proteomic databases

MaxQBiO43125.

Interactioni

Protein-protein interaction databases

BioGridi276489. 6 interactions.
MINTiMINT-4675282.

Structurei

3D structure databases

ProteinModelPortaliO43125.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini140 – 19960SH3PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 SH3 domain.PROSITE-ProRule annotation

Keywords - Domaini

SH3 domain

Phylogenomic databases

InParanoidiO43125.
OMAiEYVNDDW.
OrthoDBiEOG75XGZN.
PhylomeDBiO43125.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR013315. Spectrin_alpha_SH3.
[Graphical view]
PfamiPF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
PR01887. SPECTRNALPHA.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O43125-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDHKNYLNHV IRGIYNDFQF LVDEGVVERS ALDWVHANIH LQDGPASPVT
60 70 80 90 100
APAAQPVESS VPLPLPKRKS SVEKRAGSVA SAVAAMSLSQ NSGEKRTPEE
110 120 130 140 150
PRKLPGVPAP QKQSEASSVN SSTEKLPPPP SYPGPNTAHK NVERVLAMYD
160 170 180 190 200
FPGPDAGDLG FHAGEVIIVL EHVNNDWWRG ELNGKEGIFP SNYVRLLEDS
210 220 230 240 250
AVKAQPPPPP PQQNYPPAAS SSAPPMQYQQ TAYPPQQAPY PPVQAYPQAP
260 270 280 290
QQPIVVAQPT EHKHSSTFKK IGSGLGSAFV FGAGATAGAD LVNSIF
Length:296
Mass (Da):31,737
Last modified:June 1, 1998 - v1
Checksum:i2155ED0CCFD6F6F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB011825 mRNA. Translation: BAA25107.1.
CU329671 Genomic DNA. Translation: CAA17920.1.
PIRiT43336.
RefSeqiNP_595286.1. NM_001021193.2.

Genome annotation databases

EnsemblFungiiSPBC119.05c.1; SPBC119.05c.1:pep; SPBC119.05c.
GeneIDi2539945.
KEGGispo:SPBC119.05c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB011825 mRNA. Translation: BAA25107.1.
CU329671 Genomic DNA. Translation: CAA17920.1.
PIRiT43336.
RefSeqiNP_595286.1. NM_001021193.2.

3D structure databases

ProteinModelPortaliO43125.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276489. 6 interactions.
MINTiMINT-4675282.

Proteomic databases

MaxQBiO43125.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC119.05c.1; SPBC119.05c.1:pep; SPBC119.05c.
GeneIDi2539945.
KEGGispo:SPBC119.05c.

Organism-specific databases

EuPathDBiFungiDB:SPBC119.05c.
PomBaseiSPBC119.05c.

Phylogenomic databases

InParanoidiO43125.
OMAiEYVNDDW.
OrthoDBiEOG75XGZN.
PhylomeDBiO43125.

Miscellaneous databases

PROiO43125.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR013315. Spectrin_alpha_SH3.
[Graphical view]
PfamiPF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
PR01887. SPECTRNALPHA.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "S.pombe SH3 domain containing protein."
    Kawamukai M.
    Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiCSH3_SCHPO
AccessioniPrimary (citable) accession number: O43125
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: June 1, 1998
Last modified: June 8, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.