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Protein

Pantothenate transporter liz1

Gene

liz1

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Transports pantothenate into the cell.1 Publication

GO - Molecular functioni

  • pantothenate transmembrane transporter activity Source: PomBase

GO - Biological processi

  • pantothenate import across plasma membrane Source: PomBase

Keywordsi

Biological processTransport

Protein family/group databases

TCDBi2.A.1.14.17 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Pantothenate transporter liz1
Gene namesi
Name:liz1
ORF Names:SPBC2G2.01c, SPBC4B4.13c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC2G2.01c
PomBaseiSPBC2G2.01c liz1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Transmembranei72 – 92HelicalSequence analysisAdd BLAST21
Transmembranei98 – 118HelicalSequence analysisAdd BLAST21
Transmembranei128 – 148HelicalSequence analysisAdd BLAST21
Transmembranei159 – 179HelicalSequence analysisAdd BLAST21
Transmembranei194 – 214HelicalSequence analysisAdd BLAST21
Transmembranei263 – 283HelicalSequence analysisAdd BLAST21
Transmembranei300 – 320HelicalSequence analysisAdd BLAST21
Transmembranei329 – 349HelicalSequence analysisAdd BLAST21
Transmembranei357 – 377HelicalSequence analysisAdd BLAST21
Transmembranei390 – 410HelicalSequence analysisAdd BLAST21
Transmembranei423 – 443HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001213701 – 514Pantothenate transporter liz1Add BLAST514

Proteomic databases

MaxQBiO43000
PaxDbiO43000
PRIDEiO43000

PTM databases

iPTMnetiO43000

Interactioni

Protein-protein interaction databases

BioGridi276871, 66 interactors
STRINGi4896.SPBC2G2.01c.1

Structurei

3D structure databases

ProteinModelPortaliO43000
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000179304
InParanoidiO43000
KOiK03448
OMAiFYSATFA
OrthoDBiEOG092C2VR3
PhylomeDBiO43000

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

O43000-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALLNRLAKT FSPYYGLNKV EQKLLIKIDW FILSYCCVSY FINYLDRSSI
60 70 80 90 100
NNAYLSGMQE DLKMHGNELQ DINVVFTCGY IIGQLPGSYA LQRVPARLWF
110 120 130 140 150
SVMNILWGLM TIFSFAVHSV RALMILRFFM AVAEASTFAG THYILGAWYK
160 170 180 190 200
ESELCKRAGI FSASGLVGTM FAGYLQTAVH SSLNGKGGLS GWRWLFIIDG
210 220 230 240 250
ILTIPLSLYG LFLFPDVPET TKAPYFTEQE KELSFKRLPA RPKKKPLTLK
260 270 280 290 300
AIKDIVRSWR IYGLCILWIF SGETQAIAVN VLMGQWMKWS NKFSVAQINN
310 320 330 340 350
YPTVITAVGV VSTLGASVIS DKLAGNPRWP FGLFLCVITT VSATILLAWN
360 370 380 390 400
VPDGAKFFAY FASGCTYAGQ AVWFSWANDI CRDNDQERGV VVFLMNMCQN
410 420 430 440 450
IWHIWWAPIM YPNTDTPRFI KGLIGLLVVG GIVFVSSCIV SYMQIRDKRI
460 470 480 490 500
KRSIQDAKDF DDVFTEHESL ELKKIGKNDE ESLNTTNAVK EISSPGLVIT
510
RQRISMPKET NAQD
Length:514
Mass (Da):57,964
Last modified:August 1, 1999 - v2
Checksum:iA4026A704EC1FECB
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti445 – 447IRD → SAI in BAA13885 (PubMed:9501991).Curated3

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF052688 Genomic DNA Translation: AAC06236.1
CU329671 Genomic DNA Translation: CAA19293.1
D89224 mRNA Translation: BAA13885.1
PIRiT40485
RefSeqiNP_596430.1, NM_001022349.2

Genome annotation databases

EnsemblFungiiSPBC2G2.01c.1; SPBC2G2.01c.1:pep; SPBC2G2.01c
KEGGispo:SPBC2G2.01c

Similar proteinsi

Entry informationi

Entry nameiLIZ1_SCHPO
AccessioniPrimary (citable) accession number: O43000
Secondary accession number(s): P78874, Q1L845
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: August 1, 1999
Last modified: March 28, 2018
This is version 108 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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