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Protein

Uncharacterized ABC transporter ATP-binding protein C16H5.08c

Gene

SPBC16H5.08c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi108 – 1158ATPPROSITE-ProRule annotation
Nucleotide bindingi423 – 4308ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein C16H5.08c
Gene namesi
ORF Names:SPBC16H5.08c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16H5.08c.
PomBaseiSPBC16H5.08c.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 618618Uncharacterized ABC transporter ATP-binding protein C16H5.08cPRO_0000310286Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei50 – 501Phosphoserine1 Publication
Modified residuei53 – 531Phosphoserine1 Publication
Modified residuei54 – 541Phosphothreonine1 Publication
Modified residuei55 – 551Phosphoserine1 Publication
Modified residuei64 – 641Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO42943.
PRIDEiO42943.

PTM databases

iPTMnetiO42943.

Interactioni

Protein-protein interaction databases

BioGridi276616. 3 interactions.
MINTiMINT-4674173.

Structurei

3D structure databases

ProteinModelPortaliO42943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini76 – 325250ABC transporter 1PROSITE-ProRule annotationAdd
BLAST
Domaini388 – 609222ABC transporter 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated
Contains 2 ABC transporter domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000271637.
InParanoidiO42943.
KOiK06185.
OMAiANERYST.
OrthoDBiEOG092C22OB.
PhylomeDBiO42943.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR032781. ABC_tran_Xtn.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
PF12848. ABC_tran_Xtn. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O42943-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSKSASKLK REAKKAERLA AKGESVKPSK KNGTKNGKDK EVDGVTKDLS
60 70 80 90 100
ELSTSDPIFE RSASGVLTSQ PMSRDIKIDS YTLSFHGRLL IENATIELNH
110 120 130 140 150
GQRYGLLGDN GSGKSTFLES VAARDVEYPE HIDSYLLNAE AEPSDVNAVD
160 170 180 190 200
YIIQSAKDKV QKLEAEIEEL STADDVDDVL LESKYEELDD MDPSTFEAKA
210 220 230 240 250
AMILHGLGFT QEMMAKPTKD MSGGWRMRVA LSRALFIKPS LLLLDEPTNH
260 270 280 290 300
LDLEAVVWLE NYLAKYDKIL VVTSHSQDFL NNVCTNIIDL TSKKQLVYYG
310 320 330 340 350
GNFDIYMRTK EENETNQMKA YLKQQEEIAH IKKFIASAGT YANLVRQAKS
360 370 380 390 400
KQKIIDKMEA AGLVEKPEPP RQFSFEFDEV RKLPPPIIAF NDVAFSYDGN
410 420 430 440 450
LDHALYRDLS FGIDMDSRVA IVGKNGTGKS TLLNLITGLL IPIEGNVSRY
460 470 480 490 500
SGLKMAKYSQ HSADQLPYDK SPLEYIMDTY KPKFPERELQ QWRSVLGKFG
510 520 530 540 550
LSGLHQTSEI RTLSDGLKSR VVFAALALEQ PHILLLDEPT NHLDITSIDA
560 570 580 590 600
LAKAINVWTG GVVLVSHDFR LIGQVSKELW EVKDKKVVKL DCSIEEYKKS
610
MAKEVQSRDT TAKVKHLI
Length:618
Mass (Da):69,213
Last modified:June 1, 1998 - v1
Checksum:i2F547D71A7986CA4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA17906.1.
PIRiT39617.
RefSeqiNP_595939.1. NM_001021847.2.

Genome annotation databases

EnsemblFungiiSPBC16H5.08c.1; SPBC16H5.08c.1:pep; SPBC16H5.08c.
GeneIDi2540078.
KEGGispo:SPBC16H5.08c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA17906.1.
PIRiT39617.
RefSeqiNP_595939.1. NM_001021847.2.

3D structure databases

ProteinModelPortaliO42943.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276616. 3 interactions.
MINTiMINT-4674173.

PTM databases

iPTMnetiO42943.

Proteomic databases

MaxQBiO42943.
PRIDEiO42943.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC16H5.08c.1; SPBC16H5.08c.1:pep; SPBC16H5.08c.
GeneIDi2540078.
KEGGispo:SPBC16H5.08c.

Organism-specific databases

EuPathDBiFungiDB:SPBC16H5.08c.
PomBaseiSPBC16H5.08c.

Phylogenomic databases

HOGENOMiHOG000271637.
InParanoidiO42943.
KOiK06185.
OMAiANERYST.
OrthoDBiEOG092C22OB.
PhylomeDBiO42943.

Miscellaneous databases

PROiO42943.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR032781. ABC_tran_Xtn.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
PF12848. ABC_tran_Xtn. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBP8_SCHPO
AccessioniPrimary (citable) accession number: O42943
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: June 1, 1998
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.