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Protein

Uncharacterized MFS-type transporter C16A3.17c

Gene

SPBC16A3.17c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized MFS-type transporter C16A3.17c
Gene namesi
ORF Names:SPBC16A3.17c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16A3.17c.
PomBaseiSPBC16A3.17c.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei97 – 11721HelicalSequence analysisAdd
BLAST
Transmembranei135 – 15521HelicalSequence analysisAdd
BLAST
Transmembranei162 – 18221HelicalSequence analysisAdd
BLAST
Transmembranei192 – 21221HelicalSequence analysisAdd
BLAST
Transmembranei223 – 24321HelicalSequence analysisAdd
BLAST
Transmembranei251 – 27121HelicalSequence analysisAdd
BLAST
Transmembranei290 – 31021HelicalSequence analysisAdd
BLAST
Transmembranei321 – 34121HelicalSequence analysisAdd
BLAST
Transmembranei359 – 37921HelicalSequence analysisAdd
BLAST
Transmembranei396 – 41621HelicalSequence analysisAdd
BLAST
Transmembranei423 – 44321HelicalSequence analysisAdd
BLAST
Transmembranei452 – 47221HelicalSequence analysisAdd
BLAST
Transmembranei489 – 50921HelicalSequence analysisAdd
BLAST
Transmembranei552 – 57221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 599599Uncharacterized MFS-type transporter C16A3.17cPRO_0000343518Add
BLAST

Proteomic databases

MaxQBiO42922.

Interactioni

Protein-protein interaction databases

MINTiMINT-4673996.

Structurei

3D structure databases

ProteinModelPortaliO42922.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000155473.
InParanoidiO42922.
OMAiTGIVWAI.
OrthoDBiEOG092C1VFC.
PhylomeDBiO42922.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 3 hits.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O42922-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSSSHNSF SGSKTNAAEG QNSIDGLSLK KTTSPFILTA YPSNEEKEVK
60 70 80 90 100
ETDIVPDENK VNELDVHKQS TEFSKQESAS NDDDTNIQLI PENNMKIVVP
110 120 130 140 150
ALILTLFLAA LDNTIVTTAL PTIAEDFNDT SSSSWIGSAY VLASNAVLPA
160 170 180 190 200
VGVFCNILGR KIVLYICIFF FMLGSALCGA SQNMIWLIVC RAIQGLGGGG
210 220 230 240 250
IISLVNIIIS DITPLRTRPM YSGILATAWG AALVAGPIIG GAICQRTTWR
260 270 280 290 300
WIFFINLPSG GIATALIVVF LHLLPCERTS FKKFLKTFDF IGLVCVITGI
310 320 330 340 350
VLILLGISLG ASSGKWRRAN ILCYLIIGGC LFVFAFIYDT FTKRNAVLPP
360 370 380 390 400
PFFKNRSSAA LLACSSFFYL NYMLFAYYVP QYFQRIRGDN PIMSGVHTIP
410 420 430 440 450
CAAVLCFFCT TVGMVLRKLG RYLPLIYVGY ISCVAGMGAM ICVNATTSMS
460 470 480 490 500
KVMGLTTIFM FGSGFLFLPP LIAMQATFPP AMTSMATATL MFIRTMGGSI
510 520 530 540 550
GITVGEVIFN ERVTQSFDGN TTYAQLSYKQ VERLPQELQI RVKNTYASAF
560 570 580 590
RVIWIFCTVV MAIGFASIFF IKSRPLISNA QSVPAKKKGD SDEKPAEKV
Length:599
Mass (Da):65,297
Last modified:June 1, 1998 - v1
Checksum:i49E5FE3EAFA2BC0F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA16868.1.
PIRiT39535.
RefSeqiNP_596772.1. NM_001023793.2.

Genome annotation databases

EnsemblFungiiSPBC16A3.17c.1; SPBC16A3.17c.1:pep; SPBC16A3.17c.
GeneIDi2539979.
KEGGispo:SPBC16A3.17c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA16868.1.
PIRiT39535.
RefSeqiNP_596772.1. NM_001023793.2.

3D structure databases

ProteinModelPortaliO42922.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4673996.

Proteomic databases

MaxQBiO42922.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC16A3.17c.1; SPBC16A3.17c.1:pep; SPBC16A3.17c.
GeneIDi2539979.
KEGGispo:SPBC16A3.17c.

Organism-specific databases

EuPathDBiFungiDB:SPBC16A3.17c.
PomBaseiSPBC16A3.17c.

Phylogenomic databases

HOGENOMiHOG000155473.
InParanoidiO42922.
OMAiTGIVWAI.
OrthoDBiEOG092C1VFC.
PhylomeDBiO42922.

Miscellaneous databases

PROiO42922.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 3 hits.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBIH_SCHPO
AccessioniPrimary (citable) accession number: O42922
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: June 1, 1998
Last modified: September 7, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.