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Protein

60S ribosomal protein L19-B

Gene

rpl1902

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-SPO-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SPO-72689 Formation of a pool of free 40S subunits
R-SPO-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SPO-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SPO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19-B
Gene namesi
Name:rpl1902
Synonyms:rpl19-2Imported, rpl19b
ORF Names:SPCC1682.14
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1682.14
PomBaseiSPCC1682.14 rpl1902

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00003472812 – 19360S ribosomal protein L19-BAdd BLAST192

Proteomic databases

MaxQBiO42699
PaxDbiO42699
PRIDEiO42699

PTM databases

iPTMnetiO42699

Interactioni

Protein-protein interaction databases

BioGridi275749, 55 interactors
IntActiO42699, 2 interactors
STRINGi4896.SPCC1682.14.1

Structurei

3D structure databases

ProteinModelPortaliO42699
SMRiO42699
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL19 family.Sequence analysis

Phylogenomic databases

HOGENOMiHOG000231277
InParanoidiO42699
KOiK02885
OMAiNRVWIDP
OrthoDBiEOG092C00Q9
PhylomeDBiO42699

Family and domain databases

CDDicd01417 Ribosomal_L19e_E, 1 hit
Gene3Di1.10.1650.10, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR015972 Ribosomal_L19/L19e_dom1
IPR033935 Ribosomal_L19_euka
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O42699-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANLRTQKRL AASVLKCGKR KVWMDPNEIS EISNANSRQN IRKLVKDGLV
60 70 80 90 100
IRKPNLMHSR FRIRKTHAAK RLGRHTGYGK RKGTAEARMP STVVWMRRQR
110 120 130 140 150
VLRRLLRKYR ESGKIDKHLY HTLYLEAKGN TFKHKRALIE HIQRAKAEAN
160 170 180 190
RTKLIQEQQD ARRARAKAAR QRRAKAVEEK REQIYTAAEK IEE
Length:193
Mass (Da):22,754
Last modified:May 1, 1999 - v2
Checksum:i59692E2DD9F564EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA Translation: CAA20680.1
AB010048 mRNA Translation: BAA24181.1
PIRiT41071
T43307
RefSeqiNP_587807.1, NM_001022800.2

Genome annotation databases

EnsemblFungiiSPCC1682.14.1; SPCC1682.14.1:pep; SPCC1682.14
GeneIDi2539178
KEGGispo:SPCC1682.14

Similar proteinsi

Entry informationi

Entry nameiRL19B_SCHPO
AccessioniPrimary (citable) accession number: O42699
Secondary accession number(s): Q7LWD0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: May 1, 1999
Last modified: March 28, 2018
This is version 112 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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