O42415 (O42415_CHICK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Spi-1/PU.1 transcription factor EMBL CAA72901.1
Organism	Gallus gallus (Chicken) EMBL CAA72901.1
Taxonomic identifier	9031 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Sauropsida › Sauria › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ETS family. RuleBase RU004019 Contains 1 ETS DNA-binding domain. RuleBase RU004019

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU004018
Ligand	DNA-binding RuleBase RU004018
Gene Ontology (GO)
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O42415 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 774B6C918D4C6ABA	FASTA	256	29,701
	10 20 30 40 50 60 MLQACKMEGF PLIPPPSEDM VSYESDLYRQ PHDYYQYLNS DGDSHGDHYW EYHPHHVHSE 70 80 90 100 110 120 FETFGDNHFT ELQSVQPPQL QQLYRHMEIE QMHVLDSAIP TTHIGLTHQY SSPPQPSSDE 130 140 150 160 170 180 EDIERQSPPL EVSDGETDGV DPGPGIMHGE TGSKKKIRLY QFLLDLLRSG DMKDSIWWVD 190 200 210 220 230 240 KEKGTFQFSS KHKEALAHRW GIQKGNRKKM TYQKMARALR NYGKTGEVKK VKKKLTYQFS 250 GEVMGRGVAD RKHYPH

References

[1]

"Isolation and characterization of a chicken homologue of the Spi-1/PU.1 transcription factor." Kherrouche Z., Beuscart A., Huguet C., Flourens A., Moreau-Gachelin F., Stehelin D., Coll J. Oncogene 16:1357-1367(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Spafas EMBL CAA72901.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Y12225 mRNA. Translation: CAA72901.1.
IPI	IPI00823003.
RefSeq	NP_990354.1. NM_205023.1.
UniGene	Gga.1313.
3D structure databases
HSSP	HSSP built from PDB template 1PUE based on UniProtKB P17433.
ProteinModelPortal	O42415.
SMR	O42415. Positions 156-244.
ModBase	Search...
Protein-protein interaction databases
STRING	9031.ENSGALP00000013176.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	395879.
KEGG	gga:395879.
Organism-specific databases
CTD	6688.
Phylogenomic databases
eggNOG	NOG237824.
HOGENOM	HOG000095520.
HOVERGEN	HBG002474.
KO	K09438.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR000418. Ets_dom. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00178. Ets. 1 hit. [Graphical view]
PRINTS	PR00454. ETSDOMAIN.
SMART	SM00413. ETS. 1 hit. [Graphical view]
PROSITE	PS00345. ETS_DOMAIN_1. 1 hit. PS00346. ETS_DOMAIN_2. 1 hit. PS50061. ETS_DOMAIN_3. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20815946.

Entry information

Entry name

O42415_CHICK

Accession

Primary (citable) accession number: O42415

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	May 1, 2013
This is version 72 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)