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O42415

- O42415_CHICK

UniProt

O42415 - O42415_CHICK

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Protein
Submitted name: Spi-1/PU.1 transcription factor
Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Spi-1/PU.1 transcription factorImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000013176.

Structurei

3D structure databases

ProteinModelPortaliO42415.
SMRiO42415. Positions 156-244.

Family & Domainsi

Sequence similaritiesi

Belongs to the ETS family.UniRule annotation
Contains 1 ETS DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiNOG237824.
HOGENOMiHOG000095520.
HOVERGENiHBG002474.
KOiK09438.
PhylomeDBiO42415.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000418. Ets_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00178. Ets. 1 hit.
[Graphical view]
PRINTSiPR00454. ETSDOMAIN.
SMARTiSM00413. ETS. 1 hit.
[Graphical view]
PROSITEiPS00345. ETS_DOMAIN_1. 1 hit.
PS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O42415-1 [UniParc]FASTAAdd to Basket

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MLQACKMEGF PLIPPPSEDM VSYESDLYRQ PHDYYQYLNS DGDSHGDHYW    50
EYHPHHVHSE FETFGDNHFT ELQSVQPPQL QQLYRHMEIE QMHVLDSAIP 100
TTHIGLTHQY SSPPQPSSDE EDIERQSPPL EVSDGETDGV DPGPGIMHGE 150
TGSKKKIRLY QFLLDLLRSG DMKDSIWWVD KEKGTFQFSS KHKEALAHRW 200
GIQKGNRKKM TYQKMARALR NYGKTGEVKK VKKKLTYQFS GEVMGRGVAD 250
RKHYPH 256
Length:256
Mass (Da):29,701
Last modified:January 1, 1998 - v1
Checksum:i774B6C918D4C6ABA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y12225 mRNA. Translation: CAA72901.1.
RefSeqiNP_990354.1. NM_205023.1.
UniGeneiGga.1313.

Genome annotation databases

GeneIDi395879.
KEGGigga:395879.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y12225 mRNA. Translation: CAA72901.1 .
RefSeqi NP_990354.1. NM_205023.1.
UniGenei Gga.1313.

3D structure databases

ProteinModelPortali O42415.
SMRi O42415. Positions 156-244.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9031.ENSGALP00000013176.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 395879.
KEGGi gga:395879.

Organism-specific databases

CTDi 6688.

Phylogenomic databases

eggNOGi NOG237824.
HOGENOMi HOG000095520.
HOVERGENi HBG002474.
KOi K09438.
PhylomeDBi O42415.

Miscellaneous databases

NextBioi 20815946.
PROi O42415.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR000418. Ets_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00178. Ets. 1 hit.
[Graphical view ]
PRINTSi PR00454. ETSDOMAIN.
SMARTi SM00413. ETS. 1 hit.
[Graphical view ]
PROSITEi PS00345. ETS_DOMAIN_1. 1 hit.
PS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Isolation and characterization of a chicken homologue of the Spi-1/PU.1 transcription factor."
    Kherrouche Z., Beuscart A., Huguet C., Flourens A., Moreau-Gachelin F., Stehelin D., Coll J.
    Oncogene 16:1357-1367(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SpafasImported.

Entry informationi

Entry nameiO42415_CHICK
AccessioniPrimary (citable) accession number: O42415
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: July 9, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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