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O42415

- O42415_CHICK

UniProt

O42415 - O42415_CHICK

Protein
Submitted name:

Spi-1/PU.1 transcription factor

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Spi-1/PU.1 transcription factorImported
    OrganismiGallus gallus (Chicken)Imported
    Taxonomic identifieri9031 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-KW

    Keywords - Cellular componenti

    NucleusUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi9031.ENSGALP00000013176.

    Structurei

    3D structure databases

    ProteinModelPortaliO42415.
    SMRiO42415. Positions 156-244.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ETS family.UniRule annotation
    Contains 1 ETS DNA-binding domain.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG237824.
    HOGENOMiHOG000095520.
    HOVERGENiHBG002474.
    KOiK09438.
    PhylomeDBiO42415.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR000418. Ets_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00178. Ets. 1 hit.
    [Graphical view]
    PRINTSiPR00454. ETSDOMAIN.
    SMARTiSM00413. ETS. 1 hit.
    [Graphical view]
    PROSITEiPS00345. ETS_DOMAIN_1. 1 hit.
    PS00346. ETS_DOMAIN_2. 1 hit.
    PS50061. ETS_DOMAIN_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O42415-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLQACKMEGF PLIPPPSEDM VSYESDLYRQ PHDYYQYLNS DGDSHGDHYW    50
    EYHPHHVHSE FETFGDNHFT ELQSVQPPQL QQLYRHMEIE QMHVLDSAIP 100
    TTHIGLTHQY SSPPQPSSDE EDIERQSPPL EVSDGETDGV DPGPGIMHGE 150
    TGSKKKIRLY QFLLDLLRSG DMKDSIWWVD KEKGTFQFSS KHKEALAHRW 200
    GIQKGNRKKM TYQKMARALR NYGKTGEVKK VKKKLTYQFS GEVMGRGVAD 250
    RKHYPH 256
    Length:256
    Mass (Da):29,701
    Last modified:January 1, 1998 - v1
    Checksum:i774B6C918D4C6ABA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y12225 mRNA. Translation: CAA72901.1.
    RefSeqiNP_990354.1. NM_205023.1.
    UniGeneiGga.1313.

    Genome annotation databases

    GeneIDi395879.
    KEGGigga:395879.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y12225 mRNA. Translation: CAA72901.1 .
    RefSeqi NP_990354.1. NM_205023.1.
    UniGenei Gga.1313.

    3D structure databases

    ProteinModelPortali O42415.
    SMRi O42415. Positions 156-244.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9031.ENSGALP00000013176.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 395879.
    KEGGi gga:395879.

    Organism-specific databases

    CTDi 6688.

    Phylogenomic databases

    eggNOGi NOG237824.
    HOGENOMi HOG000095520.
    HOVERGENi HBG002474.
    KOi K09438.
    PhylomeDBi O42415.

    Miscellaneous databases

    NextBioi 20815946.
    PROi O42415.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR000418. Ets_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00178. Ets. 1 hit.
    [Graphical view ]
    PRINTSi PR00454. ETSDOMAIN.
    SMARTi SM00413. ETS. 1 hit.
    [Graphical view ]
    PROSITEi PS00345. ETS_DOMAIN_1. 1 hit.
    PS00346. ETS_DOMAIN_2. 1 hit.
    PS50061. ETS_DOMAIN_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Isolation and characterization of a chicken homologue of the Spi-1/PU.1 transcription factor."
      Kherrouche Z., Beuscart A., Huguet C., Flourens A., Moreau-Gachelin F., Stehelin D., Coll J.
      Oncogene 16:1357-1367(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: SpafasImported.

    Entry informationi

    Entry nameiO42415_CHICK
    AccessioniPrimary (citable) accession number: O42415
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 1, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)